RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 LYZL1Q6UWQ5 148 aa13.94□□□□□ -0.18
RGPD6-211ENST00000490990 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
RGPD6-211ENST00000490990 ABCA13Q86UQ4 5058 aa13.93□□□□□ -0.18
RGPD6-211ENST00000490990 TRAV8-3A0A0A6YYJ7 113 aa13.93□□□□□ -0.18
RGPD6-211ENST00000490990 CHCHD7Q9BUK0 85 aa13.93□□□□□ -0.18
RGPD6-211ENST00000490990 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
RGPD6-211ENST00000490990 RNASE7Q9H1E1 156 aaKnown RBP13.93□□□□□ -0.18
RGPD6-211ENST00000490990 TRBV6-8A0A0A6YYG3 113 aa13.92□□□□□ -0.18
RGPD6-211ENST00000490990 CTRLP40313 264 aa13.92□□□□□ -0.18
RGPD6-211ENST00000490990 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
RGPD6-211ENST00000490990 MGPP08493 103 aa13.91□□□□□ -0.18
RGPD6-211ENST00000490990 M0QY20 66 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 NTF3P20783 257 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 WDR73Q6P4I2 378 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 MAPKAPK5-AS1Q8N8E1 139 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.18
RGPD6-211ENST00000490990 CNFNQ9BYD5 112 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 KRTAP4-5Q9BYR2 181 aa13.9□□□□□ -0.18
RGPD6-211ENST00000490990 A0A087WX48 190 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 NDUFS6O75380 124 aaKnown RBP13.89□□□□□ -0.19
RGPD6-211ENST00000490990 TRGC1P0CF51 173 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 SUMO4Q6EEV6 95 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 Q8N814 137 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 FAM210AQ96ND0 272 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 KLK12Q9UKR0 248 aa13.89□□□□□ -0.19
RGPD6-211ENST00000490990 KRTAP10-1P60331 282 aa13.88□□□□□ -0.19
RGPD6-211ENST00000490990 NTM-AS1Q6ZSK4 140 aa13.88□□□□□ -0.19
RGPD6-211ENST00000490990 NTN5Q8WTR8 489 aaPredicted RBP13.88□□□□□ -0.19
RGPD6-211ENST00000490990 DNAJC30Q96LL9 226 aa13.88□□□□□ -0.19
RGPD6-211ENST00000490990 EIF5A2Q9GZV4 153 aaKnown RBP13.88□□□□□ -0.19
RGPD6-211ENST00000490990 DPH3P1Q9H4G8 78 aa13.88□□□□□ -0.19
RGPD6-211ENST00000490990 H7C1H1 209 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 CEBPGP53567 150 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 WFDC2Q14508 124 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 ELOBQ15370 118 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 TMEM97Q5BJF2 176 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 KCNIP4Q6PIL6 250 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 FAM231DQ6ZW35 169 aa13.87□□□□□ -0.19
RGPD6-211ENST00000490990 GTSF1Q8WW33 167 aa13.86□□□□□ -0.19
RGPD6-211ENST00000490990 COX11Q9Y6N1 276 aa13.86□□□□□ -0.19
RGPD6-211ENST00000490990 IGLV5-52A0A0A0MRZ9 124 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 TMEM262E9PQX1 116 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 GCSHP23434 173 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 TWIST1Q15672 202 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 MPV17L2Q567V2 206 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 Q8N1X5 172 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 RMI2Q96E14 147 aa13.85□□□□□ -0.19
RGPD6-211ENST00000490990 GATCO43716 136 aaKnown RBP13.84□□□□□ -0.19
RGPD6-211ENST00000490990 RASL11AQ6T310 242 aa13.84□□□□□ -0.19
RGPD6-211ENST00000490990 ATRAIDQ6UW56 229 aa13.84□□□□□ -0.19
RGPD6-211ENST00000490990 UBE2WQ96B02 151 aa13.84□□□□□ -0.19
RGPD6-211ENST00000490990 SMIM7Q9BQ49 75 aa13.84□□□□□ -0.19
RGPD6-211ENST00000490990 CHCHD5Q9BSY4 110 aa13.84□□□□□ -0.19
RGPD6-211ENST00000490990 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.2
RGPD6-211ENST00000490990 XGP55808 180 aa13.83□□□□□ -0.2
RGPD6-211ENST00000490990 PKIAP61925 76 aa13.83□□□□□ -0.2
RGPD6-211ENST00000490990 TRBV25-1A0A075B6N4 114 aa13.82□□□□□ -0.2
RGPD6-211ENST00000490990 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
RGPD6-211ENST00000490990 IQCJQ1A5X6 159 aa13.82□□□□□ -0.2
RGPD6-211ENST00000490990 CT83Q5H943 113 aa13.82□□□□□ -0.2
RGPD6-211ENST00000490990 LINC01551Q86U37 167 aa13.82□□□□□ -0.2
RGPD6-211ENST00000490990 A8MWL6 223 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 LECT2O14960 151 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 Q0VG73 95 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 ENHOQ6UWT2 76 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 C15orf54Q8N8G6 183 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 BAALCQ8WXS3 180 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 NIT2Q9NQR4 276 aa13.81□□□□□ -0.2
RGPD6-211ENST00000490990 ZNF727A8MUV8 499 aa13.8□□□□□ -0.2
RGPD6-211ENST00000490990 Q8N976 141 aa13.8□□□□□ -0.2
RGPD6-211ENST00000490990 IGHV1-24A0A0C4DH33 117 aa13.79□□□□□ -0.2
RGPD6-211ENST00000490990 ANGP03950 147 aaKnown RBP13.79□□□□□ -0.2
RGPD6-211ENST00000490990 FOXA3P55318 350 aaPredicted RBP13.79□□□□□ -0.2
RGPD6-211ENST00000490990 CRPP02741 224 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 RBX1P62877 108 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 GAGE6Q13070 117 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 TEX261Q6UWH6 196 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 FRZBQ92765 325 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 PGLYRP4Q96LB8 373 aa13.78□□□□□ -0.2
RGPD6-211ENST00000490990 OSTCQ9NRP0 149 aa13.77□□□□□ -0.21
RGPD6-211ENST00000490990 DNAH8Q96JB1 4490 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 TRAV26-2A0A0B4J265 109 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 TSKUQ8WUA8 353 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 PRR34Q9NV39 138 aa13.76□□□□□ -0.21
RGPD6-211ENST00000490990 TMEM70Q9BUB7 260 aa13.75□□□□□ -0.21
RGPD6-211ENST00000490990 GFRA4Q9GZZ7 299 aa13.75□□□□□ -0.21
RGPD6-211ENST00000490990 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.74□□□□□ -0.21
RGPD6-211ENST00000490990 C9JQL5 133 aa13.74□□□□□ -0.21
RGPD6-211ENST00000490990 MIAQ16674 131 aa13.74□□□□□ -0.21
RGPD6-211ENST00000490990 FAM74A3Q4VXF1 159 aa13.74□□□□□ -0.21
RGPD6-211ENST00000490990 TMEM243Q9BU79 118 aa13.74□□□□□ -0.21
RGPD6-211ENST00000490990 FAM231BA6NCW3 169 aa13.73□□□□□ -0.21
RGPD6-211ENST00000490990 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
RGPD6-211ENST00000490990 LINC00269Q8N2A0 174 aa13.73□□□□□ -0.21
RGPD6-211ENST00000490990 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
RGPD6-211ENST00000490990 COTL1Q14019 142 aa13.72□□□□□ -0.21
RGPD6-211ENST00000490990 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms