RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
EPHB4-207ENST00000489808 NIT1Q86X76 327 aa12.83□□□□□ -0.36
EPHB4-207ENST00000489808 GTSF1Q8WW33 167 aa12.83□□□□□ -0.36
EPHB4-207ENST00000489808 A0A087WTM6 91 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 EREGO14944 169 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 MGPP08493 103 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 TWIST1Q15672 202 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 DAZ4Q86SG3 579 aaKnown RBP12.82□□□□□ -0.36
EPHB4-207ENST00000489808 LINC01551Q86U37 167 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 Q9HAA7 133 aa12.82□□□□□ -0.36
EPHB4-207ENST00000489808 DAZ3Q9NR90 486 aaKnown RBP12.82□□□□□ -0.36
EPHB4-207ENST00000489808 TRBV6-8A0A0A6YYG3 113 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 A8MWL6 223 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 LAGE3Q14657 143 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
EPHB4-207ENST00000489808 DPH3P1Q9H4G8 78 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 RYR1P21817 5038 aa12.81□□□□□ -0.36
EPHB4-207ENST00000489808 C9JQL5 133 aa12.8□□□□□ -0.36
EPHB4-207ENST00000489808 H7C1H1 209 aa12.8□□□□□ -0.36
EPHB4-207ENST00000489808 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
EPHB4-207ENST00000489808 DNAJC30Q96LL9 226 aa12.8□□□□□ -0.36
EPHB4-207ENST00000489808 URGCP-MRPS24S4R325 110 aa12.8□□□□□ -0.36
EPHB4-207ENST00000489808 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
EPHB4-207ENST00000489808 CT83Q5H943 113 aa12.79□□□□□ -0.36
EPHB4-207ENST00000489808 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 PSCAO43653 123 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
EPHB4-207ENST00000489808 PEA15Q15121 130 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 TMEM241Q24JQ0 296 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 CHCHD7Q9BUK0 85 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 OSTCQ9NRP0 149 aa12.78□□□□□ -0.36
EPHB4-207ENST00000489808 A0A087WX48 190 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 TMEM262E9PQX1 116 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 TMEM97Q5BJF2 176 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 RASL11AQ6T310 242 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 PGLYRP4Q96LB8 373 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 TM2D2Q9BX73 214 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
EPHB4-207ENST00000489808 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
EPHB4-207ENST00000489808 LRCOL1A6NCL2 159 aa12.76□□□□□ -0.37
EPHB4-207ENST00000489808 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
EPHB4-207ENST00000489808 NIT2Q9NQR4 276 aa12.76□□□□□ -0.37
EPHB4-207ENST00000489808 KLK12Q9UKR0 248 aa12.76□□□□□ -0.37
EPHB4-207ENST00000489808 HSPG2P98160 4391 aa12.75□□□□□ -0.37
EPHB4-207ENST00000489808 FUSP35637 526 aaKnown RBP eCLIP12.75□□□□□ -0.37
EPHB4-207ENST00000489808 ELOBQ15370 118 aa12.75□□□□□ -0.37
EPHB4-207ENST00000489808 TSKUQ8WUA8 353 aa12.75□□□□□ -0.37
EPHB4-207ENST00000489808 RPL23P62829 140 aaKnown RBP12.74□□□□□ -0.37
EPHB4-207ENST00000489808 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
EPHB4-207ENST00000489808 ISOC2Q96AB3 205 aa12.74□□□□□ -0.37
EPHB4-207ENST00000489808 CHCHD5Q9BSY4 110 aa12.74□□□□□ -0.37
EPHB4-207ENST00000489808 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
EPHB4-207ENST00000489808 FAM231BA6NCW3 169 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 GATD1Q8NB37 220 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 NAT8Q9UHE5 227 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 V9GYV3 84 aa12.73□□□□□ -0.37
EPHB4-207ENST00000489808 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
EPHB4-207ENST00000489808 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
EPHB4-207ENST00000489808 FRZBQ92765 325 aa12.72□□□□□ -0.37
EPHB4-207ENST00000489808 UBE2WQ96B02 151 aa12.72□□□□□ -0.37
EPHB4-207ENST00000489808 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 PKIAP61925 76 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 IQCJQ1A5X6 159 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 MPV17L2Q567V2 206 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 COX11Q9Y6N1 276 aa12.71□□□□□ -0.37
EPHB4-207ENST00000489808 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 ADIRFQ15847 76 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 RMI2Q96E14 147 aa12.7□□□□□ -0.38
EPHB4-207ENST00000489808 Q0VG73 95 aa12.69□□□□□ -0.38
EPHB4-207ENST00000489808 GAGE6Q13070 117 aa12.69□□□□□ -0.38
EPHB4-207ENST00000489808 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
EPHB4-207ENST00000489808 Q8N814 137 aa12.68□□□□□ -0.38
EPHB4-207ENST00000489808 Q8N976 141 aa12.68□□□□□ -0.38
EPHB4-207ENST00000489808 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
EPHB4-207ENST00000489808 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
EPHB4-207ENST00000489808 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
EPHB4-207ENST00000489808 RAB14P61106 215 aa12.67□□□□□ -0.38
EPHB4-207ENST00000489808 RBX1P62877 108 aa12.67□□□□□ -0.38
EPHB4-207ENST00000489808 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
EPHB4-207ENST00000489808 WFDC2Q14508 124 aa12.66□□□□□ -0.38
EPHB4-207ENST00000489808 DEFB104AQ8WTQ1 72 aa12.66□□□□□ -0.38
EPHB4-207ENST00000489808 NTN5Q8WTR8 489 aaPredicted RBP12.66□□□□□ -0.38
EPHB4-207ENST00000489808 BAALCQ8WXS3 180 aa12.66□□□□□ -0.38
EPHB4-207ENST00000489808 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
EPHB4-207ENST00000489808 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
EPHB4-207ENST00000489808 GCSHP23434 173 aa12.65□□□□□ -0.38
EPHB4-207ENST00000489808 RIGQ13278 110 aa12.65□□□□□ -0.38
EPHB4-207ENST00000489808 COTL1Q14019 142 aa12.65□□□□□ -0.38
EPHB4-207ENST00000489808 NAT8BQ9UHF3 227 aa12.65□□□□□ -0.38
EPHB4-207ENST00000489808 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms