RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
MDC1-206ENST00000489540 OSTCQ9NRP0 149 aa11.76□□□□□ -0.53
MDC1-206ENST00000489540 H7C1H1 209 aa11.75□□□□□ -0.53
MDC1-206ENST00000489540 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
MDC1-206ENST00000489540 DPH3P1Q9H4G8 78 aa11.75□□□□□ -0.53
MDC1-206ENST00000489540 MGPP08493 103 aa11.74□□□□□ -0.53
MDC1-206ENST00000489540 C15orf54Q8N8G6 183 aa11.74□□□□□ -0.53
MDC1-206ENST00000489540 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
MDC1-206ENST00000489540 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
MDC1-206ENST00000489540 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
MDC1-206ENST00000489540 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
MDC1-206ENST00000489540 TNFRSF18Q9Y5U5 241 aa11.73□□□□□ -0.53
MDC1-206ENST00000489540 FAM231BA6NCW3 169 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 IBA57-AS1B1ANH7 110 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 M0QY20 66 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 IGHV3-30P01768 117 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 IGHV3-30-5P0DP03 117 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 Q6ZRN7 208 aaPredicted RBP11.72□□□□□ -0.53
MDC1-206ENST00000489540 SMIM15Q7Z3B0 74 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
MDC1-206ENST00000489540 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
MDC1-206ENST00000489540 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
MDC1-206ENST00000489540 RPL23P62829 140 aaKnown RBP11.71□□□□□ -0.53
MDC1-206ENST00000489540 SUMO4Q6EEV6 95 aa11.71□□□□□ -0.53
MDC1-206ENST00000489540 ISOC2Q96AB3 205 aa11.71□□□□□ -0.53
MDC1-206ENST00000489540 BORCS7Q96B45 105 aa11.71□□□□□ -0.53
MDC1-206ENST00000489540 TMEM97Q5BJF2 176 aa11.7□□□□□ -0.54
MDC1-206ENST00000489540 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 ADIRFQ15847 76 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 RASL11AQ6T310 242 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 UQCC3Q6UW78 93 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 NIT1Q86X76 327 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 URGCP-MRPS24S4R325 110 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 V9GYV3 84 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 HIGD1CA8MV81 97 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 LAGE3Q14657 143 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 KCNIP4Q6PIL6 250 aa11.69□□□□□ -0.54
MDC1-206ENST00000489540 A0A1B0GUT8 65 aa11.68□□□□□ -0.54
MDC1-206ENST00000489540 FRZBQ92765 325 aa11.68□□□□□ -0.54
MDC1-206ENST00000489540 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
MDC1-206ENST00000489540 NIT2Q9NQR4 276 aa11.68□□□□□ -0.54
MDC1-206ENST00000489540 EREGO14944 169 aa11.67□□□□□ -0.54
MDC1-206ENST00000489540 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
MDC1-206ENST00000489540 A0A087WX48 190 aa11.66□□□□□ -0.54
MDC1-206ENST00000489540 ELOBQ15370 118 aa11.66□□□□□ -0.54
MDC1-206ENST00000489540 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 PKIAP61925 76 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 Q8N3U1 123 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 GATD1Q8NB37 220 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 PKD1P98161 4303 aa11.65□□□□□ -0.54
MDC1-206ENST00000489540 RIGQ13278 110 aa11.64□□□□□ -0.55
MDC1-206ENST00000489540 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
MDC1-206ENST00000489540 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
MDC1-206ENST00000489540 Q9HAA7 133 aa11.64□□□□□ -0.55
MDC1-206ENST00000489540 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
MDC1-206ENST00000489540 PSCAO43653 123 aa11.63□□□□□ -0.55
MDC1-206ENST00000489540 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
MDC1-206ENST00000489540 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
MDC1-206ENST00000489540 CHCHD5Q9BSY4 110 aa11.63□□□□□ -0.55
MDC1-206ENST00000489540 TMEM191AQ9H0A3 160 aa11.63□□□□□ -0.55
MDC1-206ENST00000489540 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
MDC1-206ENST00000489540 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
MDC1-206ENST00000489540 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
MDC1-206ENST00000489540 SMIM27A0A1W2PRY6 76 aa11.62□□□□□ -0.55
MDC1-206ENST00000489540 A0A087WTM6 91 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 KLK12Q9UKR0 248 aa11.61□□□□□ -0.55
MDC1-206ENST00000489540 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
MDC1-206ENST00000489540 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
MDC1-206ENST00000489540 RMI2Q96E14 147 aa11.6□□□□□ -0.55
MDC1-206ENST00000489540 PKHD1P08F94 4074 aa11.59□□□□□ -0.55
MDC1-206ENST00000489540 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
MDC1-206ENST00000489540 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
MDC1-206ENST00000489540 Q0VG73 95 aa11.59□□□□□ -0.55
MDC1-206ENST00000489540 COTL1Q14019 142 aa11.59□□□□□ -0.55
MDC1-206ENST00000489540 A0A1B0GW15 77 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 RAB4AP20338 218 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 MPV17L2Q567V2 206 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 ATRAIDQ6UW56 229 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 UBE2WQ96B02 151 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
MDC1-206ENST00000489540 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
MDC1-206ENST00000489540 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
MDC1-206ENST00000489540 GAGE6Q13070 117 aa11.57□□□□□ -0.56
MDC1-206ENST00000489540 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
MDC1-206ENST00000489540 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
MDC1-206ENST00000489540 RBX1P62877 108 aa11.56□□□□□ -0.56
MDC1-206ENST00000489540 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
MDC1-206ENST00000489540 AMN1Q8IY45 258 aa11.56□□□□□ -0.56
MDC1-206ENST00000489540 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
MDC1-206ENST00000489540 NCR2O95944 276 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms