RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
SMARCD3-213ENST00000489503 A8MWL6 223 aa8.28□□□□□ -1.08
SMARCD3-213ENST00000489503 CT83Q5H943 113 aa8.28□□□□□ -1.08
SMARCD3-213ENST00000489503 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
SMARCD3-213ENST00000489503 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
SMARCD3-213ENST00000489503 V9GYV3 84 aa8.28□□□□□ -1.08
SMARCD3-213ENST00000489503 TRAV9-2A0A087WT02 112 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 TRAV26-2A0A0B4J265 109 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 M0QY20 66 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 RAB14P61106 215 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 TSKUQ8WUA8 353 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 Q9HAA7 133 aa8.27□□□□□ -1.09
SMARCD3-213ENST00000489503 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
SMARCD3-213ENST00000489503 WDR73Q6P4I2 378 aa8.26□□□□□ -1.09
SMARCD3-213ENST00000489503 DAZ4Q86SG3 579 aaKnown RBP8.26□□□□□ -1.09
SMARCD3-213ENST00000489503 C15orf54Q8N8G6 183 aa8.26□□□□□ -1.09
SMARCD3-213ENST00000489503 DAZ3Q9NR90 486 aaKnown RBP8.26□□□□□ -1.09
SMARCD3-213ENST00000489503 A0A087WWC5 75 aa8.25□□□□□ -1.09
SMARCD3-213ENST00000489503 CLLU1Q5K131 121 aa8.25□□□□□ -1.09
SMARCD3-213ENST00000489503 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
SMARCD3-213ENST00000489503 SMDT1Q9H4I9 107 aa8.25□□□□□ -1.09
SMARCD3-213ENST00000489503 H7C1H1 209 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 NTM-AS1Q6ZSK4 140 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 NIT1Q86X76 327 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 RPL39LQ96EH5 51 aaKnown RBP8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
SMARCD3-213ENST00000489503 TRBV6-8A0A0A6YYG3 113 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 IBA57-AS1B1ANH7 110 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 GAS8-AS1O95177 125 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 BTF3P20290 206 aaKnown RBP8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 NUP35Q8NFH5 326 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 GFRA4Q9GZZ7 299 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 DNAH5Q8TE73 4624 aa8.23□□□□□ -1.09
SMARCD3-213ENST00000489503 SMIM15Q7Z3B0 74 aa8.22□□□□□ -1.09
SMARCD3-213ENST00000489503 NFE4Q86UQ8 179 aa8.22□□□□□ -1.09
SMARCD3-213ENST00000489503 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
SMARCD3-213ENST00000489503 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.09
SMARCD3-213ENST00000489503 FAM231BA6NCW3 169 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 TMEM262E9PQX1 116 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 K7EP13 123 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 GAGE6Q13070 117 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 MPV17L2Q567V2 206 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.1
SMARCD3-213ENST00000489503 A0A087WX48 190 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 NCR2O95944 276 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 Q8N976 141 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 RNF185Q96GF1 192 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
SMARCD3-213ENST00000489503 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 A0A087WTM6 91 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 C16orf90A8MZG2 172 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 PSCAO43653 123 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 ADCYAP1P18509 176 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 RIGQ13278 110 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 LAGE3Q14657 143 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 MRPL54Q6P161 138 aaKnown RBP8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 HERC2O95714 4834 aa8.19□□□□□ -1.1
SMARCD3-213ENST00000489503 IGHV1-24A0A0C4DH33 117 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 RPS10P46783 165 aaKnown RBP8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 CAMPP49913 170 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 WFDC2Q14508 124 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 ATRAIDQ6UW56 229 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
SMARCD3-213ENST00000489503 LECT2O14960 151 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 RAB4AP20338 218 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 AMTP48728 403 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 TMEM243Q9BU79 118 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
SMARCD3-213ENST00000489503 IGKV2D-24A0A075B6R9 120 aa8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 LRCOL1A6NCL2 159 aa8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 RBX1P62877 108 aa8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 COTL1Q14019 142 aa8.16□□□□□ -1.1
SMARCD3-213ENST00000489503 APOBP04114 4563 aaKnown RBP8.15□□□□□ -1.1
SMARCD3-213ENST00000489503 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
SMARCD3-213ENST00000489503 EREGO14944 169 aa8.15□□□□□ -1.1
SMARCD3-213ENST00000489503 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms