RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DAZ3Q9NR90 486 aaKnown RBP10.67□□□□□ -0.7
CTDSP1-209ENST00000488627 DNAH5Q8TE73 4624 aa10.67□□□□□ -0.7
CTDSP1-209ENST00000488627 ERVFC1-1P60608 527 aa10.66□□□□□ -0.7
CTDSP1-209ENST00000488627 LAGE3Q14657 143 aa10.66□□□□□ -0.7
CTDSP1-209ENST00000488627 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
CTDSP1-209ENST00000488627 TRBV6-8A0A0A6YYG3 113 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 C9JQL5 133 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 Q9HAA7 133 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
CTDSP1-209ENST00000488627 ZNF727A8MUV8 499 aa10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 MGPP08493 103 aa10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 TRGC1P0CF51 173 aa10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 FOXA3P55318 350 aaPredicted RBP10.64□□□□□ -0.71
CTDSP1-209ENST00000488627 SRSF3P84103 164 aaKnown RBP10.63□□□□□ -0.71
CTDSP1-209ENST00000488627 TWIST1Q15672 202 aa10.63□□□□□ -0.71
CTDSP1-209ENST00000488627 CT83Q5H943 113 aa10.63□□□□□ -0.71
CTDSP1-209ENST00000488627 DPH3P1Q9H4G8 78 aa10.63□□□□□ -0.71
CTDSP1-209ENST00000488627 HSPG2P98160 4391 aa10.63□□□□□ -0.71
CTDSP1-209ENST00000488627 A8MWL6 223 aa10.62□□□□□ -0.71
CTDSP1-209ENST00000488627 EREGO14944 169 aa10.62□□□□□ -0.71
CTDSP1-209ENST00000488627 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
CTDSP1-209ENST00000488627 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
CTDSP1-209ENST00000488627 TRAV8-3A0A0A6YYJ7 113 aa10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 CDK2AP2O75956 126 aa10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 OSTCQ9NRP0 149 aa10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
CTDSP1-209ENST00000488627 H7C1H1 209 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 PSCAO43653 123 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 PGLYRP4Q96LB8 373 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 KLK12Q9UKR0 248 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 URGCP-MRPS24S4R325 110 aa10.6□□□□□ -0.71
CTDSP1-209ENST00000488627 A0A087WX48 190 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 CDPF1Q6NVV7 123 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 TSKUQ8WUA8 353 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
CTDSP1-209ENST00000488627 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 RPL23P62829 140 aaKnown RBP10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 WFDC2Q14508 124 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 PEA15Q15121 130 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 MPV17L2Q567V2 206 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 ISOC2Q96AB3 205 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 SMDT1Q9H4I9 107 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 V9GYV3 84 aa10.58□□□□□ -0.72
CTDSP1-209ENST00000488627 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
CTDSP1-209ENST00000488627 FAM231BA6NCW3 169 aa10.57□□□□□ -0.72
CTDSP1-209ENST00000488627 HIGD1CA8MV81 97 aa10.57□□□□□ -0.72
CTDSP1-209ENST00000488627 ATRAIDQ6UW56 229 aa10.57□□□□□ -0.72
CTDSP1-209ENST00000488627 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
CTDSP1-209ENST00000488627 ELOBQ15370 118 aa10.56□□□□□ -0.72
CTDSP1-209ENST00000488627 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
CTDSP1-209ENST00000488627 FRZBQ92765 325 aa10.56□□□□□ -0.72
CTDSP1-209ENST00000488627 UBE2WQ96B02 151 aa10.56□□□□□ -0.72
CTDSP1-209ENST00000488627 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
CTDSP1-209ENST00000488627 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
CTDSP1-209ENST00000488627 KRTAP10-1P60331 282 aa10.55□□□□□ -0.72
CTDSP1-209ENST00000488627 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
CTDSP1-209ENST00000488627 Q8N814 137 aa10.55□□□□□ -0.72
CTDSP1-209ENST00000488627 Q8N976 141 aa10.55□□□□□ -0.72
CTDSP1-209ENST00000488627 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 PKIAP61925 76 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 RBX1P62877 108 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 GAGE6Q13070 117 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 C15orf54Q8N8G6 183 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 KRTAP4-5Q9BYR2 181 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 COX11Q9Y6N1 276 aa10.54□□□□□ -0.72
CTDSP1-209ENST00000488627 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 Q0VG73 95 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 NTN5Q8WTR8 489 aaPredicted RBP10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 RMI2Q96E14 147 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
CTDSP1-209ENST00000488627 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
CTDSP1-209ENST00000488627 ANGP03950 147 aaKnown RBP10.52□□□□□ -0.73
CTDSP1-209ENST00000488627 ADIRFQ15847 76 aa10.52□□□□□ -0.73
CTDSP1-209ENST00000488627 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
CTDSP1-209ENST00000488627 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
CTDSP1-209ENST00000488627 LECT2O14960 151 aa10.51□□□□□ -0.73
CTDSP1-209ENST00000488627 GCSHP23434 173 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms