RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 TM2D2Q9BX73 214 aa15.85■□□□□ 0.13
RNF38-208ENST00000488058 RPP21Q9H633 154 aaKnown RBP15.85■□□□□ 0.13
RNF38-208ENST00000488058 LRP1BQ9NZR2 4599 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 A0A087WX48 190 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 TRAV8-3A0A0A6YYJ7 113 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 LRCOL1A6NCL2 159 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 TMEM250H0YL14 139 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 MAPKAPK5-AS1Q8N8E1 139 aa15.84■□□□□ 0.13
RNF38-208ENST00000488058 EIF5A2Q9GZV4 153 aaKnown RBP15.84■□□□□ 0.13
RNF38-208ENST00000488058 KLK12Q9UKR0 248 aa15.83■□□□□ 0.12
RNF38-208ENST00000488058 TRBV6-8A0A0A6YYG3 113 aa15.82■□□□□ 0.12
RNF38-208ENST00000488058 TMEM262E9PQX1 116 aa15.82■□□□□ 0.12
RNF38-208ENST00000488058 TRGC1P0CF51 173 aa15.82■□□□□ 0.12
RNF38-208ENST00000488058 NTF3P20783 257 aa15.81■□□□□ 0.12
RNF38-208ENST00000488058 SUMO4Q6EEV6 95 aa15.81■□□□□ 0.12
RNF38-208ENST00000488058 H7C1H1 209 aa15.8■□□□□ 0.12
RNF38-208ENST00000488058 IGLV5-52A0A0A0MRZ9 124 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 CTRLP40313 264 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 UBE2WQ96B02 151 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 DNAJC30Q96LL9 226 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 CHCHD5Q9BSY4 110 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 CHCHD7Q9BUK0 85 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 DPH3P1Q9H4G8 78 aa15.79■□□□□ 0.12
RNF38-208ENST00000488058 M0QY20 66 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 GATCO43716 136 aaKnown RBP15.78■□□□□ 0.12
RNF38-208ENST00000488058 ELOBQ15370 118 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 TWIST1Q15672 202 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 Q8N814 137 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 RMI2Q96E14 147 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 DNAH5Q8TE73 4624 aa15.78■□□□□ 0.12
RNF38-208ENST00000488058 IGKV2D-24A0A075B6R9 120 aa15.77■□□□□ 0.12
RNF38-208ENST00000488058 KRTAP10-1P60331 282 aa15.77■□□□□ 0.12
RNF38-208ENST00000488058 TMEM97Q5BJF2 176 aa15.77■□□□□ 0.12
RNF38-208ENST00000488058 FAM210AQ96ND0 272 aa15.77■□□□□ 0.12
RNF38-208ENST00000488058 KRTAP4-5Q9BYR2 181 aa15.77■□□□□ 0.12
RNF38-208ENST00000488058 HSPG2P98160 4391 aa15.76■□□□□ 0.11
RNF38-208ENST00000488058 LECT2O14960 151 aa15.76■□□□□ 0.11
RNF38-208ENST00000488058 GCSHP23434 173 aa15.76■□□□□ 0.11
RNF38-208ENST00000488058 WDR73Q6P4I2 378 aa15.76■□□□□ 0.11
RNF38-208ENST00000488058 SMIM7Q9BQ49 75 aa15.76■□□□□ 0.11
RNF38-208ENST00000488058 WFDC2Q14508 124 aa15.75■□□□□ 0.11
RNF38-208ENST00000488058 MPV17L2Q567V2 206 aa15.75■□□□□ 0.11
RNF38-208ENST00000488058 NTM-AS1Q6ZSK4 140 aa15.75■□□□□ 0.11
RNF38-208ENST00000488058 C15orf54Q8N8G6 183 aa15.75■□□□□ 0.11
RNF38-208ENST00000488058 NTN5Q8WTR8 489 aaPredicted RBP15.75■□□□□ 0.11
RNF38-208ENST00000488058 COX11Q9Y6N1 276 aa15.75■□□□□ 0.11
RNF38-208ENST00000488058 RASL11AQ6T310 242 aa15.74■□□□□ 0.11
RNF38-208ENST00000488058 GTSF1Q8WW33 167 aa15.74■□□□□ 0.11
RNF38-208ENST00000488058 TRBV25-1A0A075B6N4 114 aa15.73■□□□□ 0.11
RNF38-208ENST00000488058 ZNF727A8MUV8 499 aa15.73■□□□□ 0.11
RNF38-208ENST00000488058 CRPP02741 224 aa15.73■□□□□ 0.11
RNF38-208ENST00000488058 ANGP03950 147 aaKnown RBP15.73■□□□□ 0.11
RNF38-208ENST00000488058 FAM231DQ6ZW35 169 aa15.73■□□□□ 0.11
RNF38-208ENST00000488058 BAALCQ8WXS3 180 aa15.73■□□□□ 0.11
RNF38-208ENST00000488058 APOBP04114 4563 aaKnown RBP15.72■□□□□ 0.11
RNF38-208ENST00000488058 SRP19P09132 144 aaKnown RBP15.72■□□□□ 0.11
RNF38-208ENST00000488058 PKIAP61925 76 aa15.72■□□□□ 0.11
RNF38-208ENST00000488058 GAGE6Q13070 117 aa15.72■□□□□ 0.11
RNF38-208ENST00000488058 PGLYRP4Q96LB8 373 aa15.72■□□□□ 0.11
RNF38-208ENST00000488058 CNFNQ9BYD5 112 aa15.72■□□□□ 0.11
RNF38-208ENST00000488058 PCLOQ9Y6V0 5065 aa15.72■□□□□ 0.11
RNF38-208ENST00000488058 A8MWL6 223 aa15.71■□□□□ 0.11
RNF38-208ENST00000488058 ATRAIDQ6UW56 229 aa15.71■□□□□ 0.11
RNF38-208ENST00000488058 Q8N1X5 172 aa15.71■□□□□ 0.11
RNF38-208ENST00000488058 Q8N976 141 aa15.71■□□□□ 0.11
RNF38-208ENST00000488058 IGHV1-24A0A0C4DH33 117 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 Q0VG73 95 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 SMIM15Q7Z3B0 74 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 LINC01551Q86U37 167 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 DEFB104AQ8WTQ1 72 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 NIT2Q9NQR4 276 aa15.7■□□□□ 0.1
RNF38-208ENST00000488058 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.69■□□□□ 0.1
RNF38-208ENST00000488058 NDUFS6O75380 124 aaKnown RBP15.69■□□□□ 0.1
RNF38-208ENST00000488058 C1orf43Q9BWL3 253 aa15.69■□□□□ 0.1
RNF38-208ENST00000488058 TRAV26-2A0A0B4J265 109 aa15.68■□□□□ 0.1
RNF38-208ENST00000488058 ENHOQ6UWT2 76 aa15.68■□□□□ 0.1
RNF38-208ENST00000488058 BORCS7Q96B45 105 aa15.68■□□□□ 0.1
RNF38-208ENST00000488058 FOXA3P55318 350 aaPredicted RBP15.67■□□□□ 0.1
RNF38-208ENST00000488058 XGP55808 180 aa15.67■□□□□ 0.1
RNF38-208ENST00000488058 IQCJQ1A5X6 159 aa15.67■□□□□ 0.1
RNF38-208ENST00000488058 CT83Q5H943 113 aa15.67■□□□□ 0.1
RNF38-208ENST00000488058 CLPSL2Q6UWE3 100 aa15.67■□□□□ 0.1
RNF38-208ENST00000488058 RBX1P62877 108 aa15.66■□□□□ 0.1
RNF38-208ENST00000488058 TEX261Q6UWH6 196 aa15.66■□□□□ 0.1
RNF38-208ENST00000488058 GATD1Q8NB37 220 aa15.66■□□□□ 0.1
RNF38-208ENST00000488058 TMEM243Q9BU79 118 aa15.65■□□□□ 0.1
RNF38-208ENST00000488058 HAMPP81172 84 aa15.64■□□□□ 0.09
RNF38-208ENST00000488058 OSTCQ9NRP0 149 aa15.64■□□□□ 0.09
RNF38-208ENST00000488058 COTL1Q14019 142 aa15.63■□□□□ 0.09
RNF38-208ENST00000488058 TSKUQ8WUA8 353 aa15.63■□□□□ 0.09
RNF38-208ENST00000488058 RPL39LQ96EH5 51 aaKnown RBP15.63■□□□□ 0.09
RNF38-208ENST00000488058 HIGD1CA8MV81 97 aa15.62■□□□□ 0.09
RNF38-208ENST00000488058 HLA-DQA1P01909 254 aa15.62■□□□□ 0.09
RNF38-208ENST00000488058 AMTP48728 403 aa15.62■□□□□ 0.09
RNF38-208ENST00000488058 TMEM241Q24JQ0 296 aa15.62■□□□□ 0.09
RNF38-208ENST00000488058 LINC00269Q8N2A0 174 aa15.62■□□□□ 0.09
RNF38-208ENST00000488058 UBE2L6O14933 153 aa15.61■□□□□ 0.09
RNF38-208ENST00000488058 MIAQ16674 131 aa15.61■□□□□ 0.09
RNF38-208ENST00000488058 FAM74A3Q4VXF1 159 aa15.61■□□□□ 0.09
RNF38-208ENST00000488058 FRZBQ92765 325 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms