RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
SDC3-204ENST00000487984 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 CXCL1P09341 107 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 XGP55808 180 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 LELP1Q5T871 98 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 ATP6V0E2Q8NHE4 81 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 GTSF1LQ9H1H1 148 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 NAT8BQ9UHF3 227 aa8.25□□□□□ -1.09
SDC3-204ENST00000487984 SMIM27A0A1W2PRY6 76 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 A8MWV9 139 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 PSCAO43653 123 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 IGHV3-30-3P0DP02 117 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 PIK3CD-AS1Q5SR53 167 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 JPT2Q9H910 190 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 Q9HAA7 133 aa8.24□□□□□ -1.09
SDC3-204ENST00000487984 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 H3BVH4 76 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 SCO1O75880 301 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 DMRTA1Q5VZB9 504 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 CBLN2Q8IUK8 224 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
SDC3-204ENST00000487984 TMSB15BA0A087X1C1 80 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 EPM2AB3EWF7 344 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 F2Z2F3 143 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 GCSHP23434 173 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
SDC3-204ENST00000487984 COX19Q49B96 90 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 DNLZQ5SXM8 178 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 Q8N3U1 123 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
SDC3-204ENST00000487984 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 Q9UF83 564 aa8.22□□□□□ -1.09
SDC3-204ENST00000487984 TRBV24-1A0A075B6N3 115 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 A0A1B0GW15 77 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 S100A8P05109 93 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 ARMS2P0C7Q2 107 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 FAT1Q14517 4588 aa8.21□□□□□ -1.1
SDC3-204ENST00000487984 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 RIGQ13278 110 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 LAGE3Q14657 143 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 ELOBQ15370 118 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 WDR73Q6P4I2 378 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 Q8N814 137 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 SYT8Q8NBV8 401 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 NUP35Q8NFH5 326 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
SDC3-204ENST00000487984 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
SDC3-204ENST00000487984 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 RHODO00212 210 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 GZMBP10144 247 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 CACNG7P62955 275 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 FAM74A4Q5TZK3 123 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 PGLYRP4Q96LB8 373 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 PHLDA3Q9Y5J5 127 aa8.19□□□□□ -1.1
SDC3-204ENST00000487984 A0A087WWL8 130 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 M0R381 172 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 CTRLP40313 264 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 HAMPP81172 84 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 Q5VSD8 79 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 LYZL1Q6UWQ5 148 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 SMIM15Q7Z3B0 74 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 GTSF1Q8WW33 167 aa8.18□□□□□ -1.1
SDC3-204ENST00000487984 TGIF2-C20orf24A0A0A6YYL0 155 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 COLCA2A8K830 154 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 SNAI2O43623 268 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 HBBP68871 147 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 WFDC2Q14508 124 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 SPANXN1Q5VSR9 72 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
SDC3-204ENST00000487984 ZFP82Q8N141 532 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.17□□□□□ -1.1
SDC3-204ENST00000487984 YPEL4Q96NS1 127 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
SDC3-204ENST00000487984 TM2D2Q9BX73 214 aa8.17□□□□□ -1.1
SDC3-204ENST00000487984 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
SDC3-204ENST00000487984 TRAV8-3A0A0A6YYJ7 113 aa8.16□□□□□ -1.1
SDC3-204ENST00000487984 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
SDC3-204ENST00000487984 MT-ND6P03923 174 aa8.16□□□□□ -1.1
SDC3-204ENST00000487984 RAB5AP20339 215 aa8.16□□□□□ -1.1
SDC3-204ENST00000487984 MRPL54Q6P161 138 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms