RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 UBE2DNLQ8IWF7 75 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 ATP6V0E2Q8NHE4 81 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 RPS10P5Q9NQ39 176 aa13.37□□□□□ -0.27
PCOLCE-208ENST00000487172 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 RAB4AP20338 218 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 CAMPP49913 170 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 RASL11AQ6T310 242 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 RNF185Q96GF1 192 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 BTF3L4Q96K17 158 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
PCOLCE-208ENST00000487172 UBE2D3P61077 147 aa13.35□□□□□ -0.27
PCOLCE-208ENST00000487172 UBE2D2P62837 147 aa13.35□□□□□ -0.27
PCOLCE-208ENST00000487172 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
PCOLCE-208ENST00000487172 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
PCOLCE-208ENST00000487172 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
PCOLCE-208ENST00000487172 GTSF1LQ9H1H1 148 aa13.34□□□□□ -0.27
PCOLCE-208ENST00000487172 NIT2Q9NQR4 276 aa13.34□□□□□ -0.27
PCOLCE-208ENST00000487172 LYSTQ99698 3801 aa13.33□□□□□ -0.27
PCOLCE-208ENST00000487172 S100PP25815 95 aa13.33□□□□□ -0.28
PCOLCE-208ENST00000487172 MRAP2Q96G30 205 aa13.32□□□□□ -0.28
PCOLCE-208ENST00000487172 TNFRSF18Q9Y5U5 241 aa13.32□□□□□ -0.28
PCOLCE-208ENST00000487172 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
PCOLCE-208ENST00000487172 TRAV26-2A0A0B4J265 109 aa13.31□□□□□ -0.28
PCOLCE-208ENST00000487172 MRPL51Q4U2R6 128 aaKnown RBP13.3□□□□□ -0.28
PCOLCE-208ENST00000487172 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
PCOLCE-208ENST00000487172 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.3□□□□□ -0.28
PCOLCE-208ENST00000487172 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
PCOLCE-208ENST00000487172 LELP1Q5T871 98 aa13.29□□□□□ -0.28
PCOLCE-208ENST00000487172 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
PCOLCE-208ENST00000487172 Q9H8V8 135 aa13.28□□□□□ -0.28
PCOLCE-208ENST00000487172 URGCP-MRPS24S4R325 110 aa13.28□□□□□ -0.28
PCOLCE-208ENST00000487172 GAS8-AS1O95177 125 aa13.27□□□□□ -0.29
PCOLCE-208ENST00000487172 PPP1R17O96001 155 aa13.27□□□□□ -0.29
PCOLCE-208ENST00000487172 TMEM97Q5BJF2 176 aa13.27□□□□□ -0.29
PCOLCE-208ENST00000487172 ATRAIDQ6UW56 229 aa13.27□□□□□ -0.29
PCOLCE-208ENST00000487172 RPL39LQ96EH5 51 aaKnown RBP13.27□□□□□ -0.29
PCOLCE-208ENST00000487172 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
PCOLCE-208ENST00000487172 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
PCOLCE-208ENST00000487172 VPS13DQ5THJ4 4388 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 SIVA1O15304 175 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 PPBPP02775 128 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 COX19Q49B96 90 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
PCOLCE-208ENST00000487172 CKS2P33552 79 aa13.24□□□□□ -0.29
PCOLCE-208ENST00000487172 RPS10P46783 165 aaKnown RBP13.24□□□□□ -0.29
PCOLCE-208ENST00000487172 ELOBQ15370 118 aa13.24□□□□□ -0.29
PCOLCE-208ENST00000487172 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
PCOLCE-208ENST00000487172 NRACQ8N912 160 aa13.24□□□□□ -0.29
PCOLCE-208ENST00000487172 TRBV24-1A0A075B6N3 115 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 SDHAF1A6NFY7 115 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 SMKR1H3BMG3 65 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 WFDC10BQ8IUB3 73 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
PCOLCE-208ENST00000487172 NCR2O95944 276 aa13.22□□□□□ -0.29
PCOLCE-208ENST00000487172 DNAH10OSP0CZ25 163 aa13.22□□□□□ -0.29
PCOLCE-208ENST00000487172 POLR2KP53803 58 aaKnown RBP13.22□□□□□ -0.29
PCOLCE-208ENST00000487172 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
PCOLCE-208ENST00000487172 IGLV2-18A0A075B6J9 118 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 D6R8Y8 96 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 PHOX2AO14813 284 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 HLA-DQA1P01909 254 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 ORMDL3Q8N138 153 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 C20orf78Q9BR46 151 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 TMEM70Q9BUB7 260 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 SACSQ9NZJ4 4579 aa13.21□□□□□ -0.29
PCOLCE-208ENST00000487172 KMT2CQ8NEZ4 4911 aaKnown RBP13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 I3L3M4 83 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 K7EP13 123 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 SUMO2P61956 95 aaKnown RBP13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 Q6ZR54 194 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
PCOLCE-208ENST00000487172 TRBV27A0A0K0K1C4 114 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 TNFRSF6BO95407 300 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 MT-ND6P03923 174 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 COTL1Q14019 142 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 LINC01556Q5JQF7 62 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 LAMTOR2Q9Y2Q5 125 aa13.19□□□□□ -0.3
PCOLCE-208ENST00000487172 TRBV25-1A0A075B6N4 114 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 TGIF2-C20orf24A0A0A6YYL0 155 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 IGHV1-24A0A0C4DH33 117 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 VCYO14598 125 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 PMCHP20382 165 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 TTC32Q5I0X7 151 aa13.18□□□□□ -0.3
PCOLCE-208ENST00000487172 KMT2AQ03164 3969 aa13.17□□□□□ -0.3
PCOLCE-208ENST00000487172 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
PCOLCE-208ENST00000487172 NIT1Q86X76 327 aa13.17□□□□□ -0.3
PCOLCE-208ENST00000487172 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
PCOLCE-208ENST00000487172 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
PCOLCE-208ENST00000487172 NPYP01303 97 aa13.16□□□□□ -0.3
PCOLCE-208ENST00000487172 APCSP02743 223 aa13.16□□□□□ -0.3
PCOLCE-208ENST00000487172 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms