RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SLC25A20O43772 301 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 IGHV1OR15-1A0A075B7D0 117 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 I3L3M4 83 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 IGKV3-20P01619 116 aa9.03□□□□□ -0.96
COL3A1-206ENST00000487010 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.97
COL3A1-206ENST00000487010 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
COL3A1-206ENST00000487010 C9JAW5 83 aa9.02□□□□□ -0.97
COL3A1-206ENST00000487010 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
COL3A1-206ENST00000487010 PIMREGQ9BSJ6 248 aa9.02□□□□□ -0.97
COL3A1-206ENST00000487010 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
COL3A1-206ENST00000487010 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
COL3A1-206ENST00000487010 M0R2P5 195 aa9.01□□□□□ -0.97
COL3A1-206ENST00000487010 LY6DQ14210 128 aa9.01□□□□□ -0.97
COL3A1-206ENST00000487010 H7C2G1 150 aa9.01□□□□□ -0.97
COL3A1-206ENST00000487010 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
COL3A1-206ENST00000487010 A0A0J9YXY3 114 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 SPINK13Q1W4C9 94 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 CLUHP3Q96NS8 147 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 ATRXP46100 2492 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 K7EQG2 157 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 C10orf105Q8TEF2 133 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 ZNF580Q9UK33 172 aa9□□□□□ -0.97
COL3A1-206ENST00000487010 COL6A6A6NMZ7 2263 aa8.99□□□□□ -0.97
COL3A1-206ENST00000487010 PSMB8P28062 276 aa8.99□□□□□ -0.97
COL3A1-206ENST00000487010 ATXN8Q156A1 80 aa8.99□□□□□ -0.97
COL3A1-206ENST00000487010 TMEM95Q3KNT9 176 aa8.99□□□□□ -0.97
COL3A1-206ENST00000487010 ELANEP08246 267 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 HIVEP3Q5T1R4 2406 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 Q1RN00 199 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 FAM104AQ969W3 186 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 LINC01600Q96MT4 127 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 SPXQ9BT56 116 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 PYGO1Q9Y3Y4 419 aa8.98□□□□□ -0.97
COL3A1-206ENST00000487010 IGF2RP11717 2491 aa8.97□□□□□ -0.97
COL3A1-206ENST00000487010 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
COL3A1-206ENST00000487010 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
COL3A1-206ENST00000487010 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
COL3A1-206ENST00000487010 LITAFQ99732 161 aa8.97□□□□□ -0.97
COL3A1-206ENST00000487010 TIMM21Q9BVV7 248 aa8.97□□□□□ -0.97
COL3A1-206ENST00000487010 TRGV11A0A075B6L2 103 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 CD28P10747 220 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 ZFAND6Q6FIF0 208 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 RNF152Q8N8N0 203 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 CITED1Q99966 193 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 EDA2RQ9HAV5 297 aa8.96□□□□□ -0.97
COL3A1-206ENST00000487010 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 MSMBP08118 114 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 GNLYP22749 145 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 Q5PR19 223 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 C10orf99Q6UWK7 81 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 NTN5Q8WTR8 489 aaPredicted RBP8.96□□□□□ -0.98
COL3A1-206ENST00000487010 RNF183Q96D59 192 aa8.96□□□□□ -0.98
COL3A1-206ENST00000487010 TRIAP1O43715 76 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 TEX29Q8N6K0 151 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 CCL19Q99731 98 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 CELSR1Q9NYQ6 3014 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 IGHV4-30-2A0A087WSY4 118 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 IGHV1-58A0A0C4DH39 117 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 AVPP01185 164 aa8.95□□□□□ -0.98
COL3A1-206ENST00000487010 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
COL3A1-206ENST00000487010 SPTAN1Q13813 2472 aaKnown RBP8.94□□□□□ -0.98
COL3A1-206ENST00000487010 RPL13AP40429 203 aaKnown RBP8.94□□□□□ -0.98
COL3A1-206ENST00000487010 PROK1P58294 105 aa8.94□□□□□ -0.98
COL3A1-206ENST00000487010 CEMP1Q6PRD7 247 aaPredicted RBP8.94□□□□□ -0.98
COL3A1-206ENST00000487010 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
COL3A1-206ENST00000487010 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
COL3A1-206ENST00000487010 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
COL3A1-206ENST00000487010 IGHV3-73A0A0B4J1V6 119 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 TMEM89A2RUT3 159 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 PRSS2P07478 247 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
COL3A1-206ENST00000487010 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
COL3A1-206ENST00000487010 ADAMTSL4-AS1Q5T5F5 129 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
COL3A1-206ENST00000487010 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 TNFRSF18Q9Y5U5 241 aa8.93□□□□□ -0.98
COL3A1-206ENST00000487010 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 ATP5J2P56134 94 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
COL3A1-206ENST00000487010 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 MIAQ16674 131 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
COL3A1-206ENST00000487010 SNCGO76070 127 aa8.91□□□□□ -0.98
COL3A1-206ENST00000487010 HTN1P15515 57 aa8.91□□□□□ -0.98
COL3A1-206ENST00000487010 CHCHD7Q9BUK0 85 aa8.91□□□□□ -0.98
COL3A1-206ENST00000487010 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
COL3A1-206ENST00000487010 H3BMM0 161 aa8.9□□□□□ -0.98
COL3A1-206ENST00000487010 GATA3P23771 443 aa8.9□□□□□ -0.98
COL3A1-206ENST00000487010 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms