RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TMEM91Q6ZNR0 172 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 DEFB132Q7Z7B7 95 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 C8orf59Q8N0T1 100 aaPredicted RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 PPP3R2Q96LZ3 170 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 CGREF1Q99674 301 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 SLC35B3Q9H1N7 401 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 HIGD1AQ9Y241 93 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 RREB1Q92766 1687 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 XRN1Q8IZH2 1706 aaKnown RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 IFT172Q9UG01 1749 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 MAP2P11137 1827 aaKnown RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 AFDNP55196 1824 aaKnown RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 KIF13AQ9H1H9 1805 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 DISP2A7MBM2 1401 aa0.8□□□□□ -2.28
SMC4-218ENST00000486711 PRG4Q92954 1404 aaPredicted RBP0.8□□□□□ -2.28
SMC4-218ENST00000486711 TCHHQ07283 1943 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 TULP4Q9NRJ4 1543 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 ADGRB1O14514 1584 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 GLI2P10070 1586 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 C3P01024 1663 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 PREX1Q8TCU6 1659 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 PPLO60437 1756 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 NAP1L6A6NFF2 107 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 FXYD1O00168 92 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 GNGT2O14610 69 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 OR2H2O95918 312 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 APOC1P02654 83 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 TRAPPC2P0DI81 140 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 TRAPPC2BP0DI82 140 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 SCGB1A1P11684 91 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 GNGT1P63211 74 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 HMGN3Q15651 99 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 CCDC58Q4VC31 144 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 RPL13AP3Q6NVV1 102 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 SMIM5Q71RC9 77 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 TAS2R8Q9NYW2 309 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 PLIN4Q96Q06 1357 aa0.79□□□□□ -2.28
SMC4-218ENST00000486711 CHD1O14646 1710 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 TJP1Q07157 1748 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 NWD2Q9ULI1 1742 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 ATP6V1G2-DDX39BF2Z307 99 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 J3QR89 54 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 S100A8P05109 93 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 HMGN1P05114 100 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 COX4I1P13073 169 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 HLA-DRB4P13762 266 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 HMGA1P17096 107 aaKnown RBP0.78□□□□□ -2.28
SMC4-218ENST00000486711 GUCA1AP43080 201 aaPredicted RBP0.78□□□□□ -2.28
SMC4-218ENST00000486711 SPINK7P58062 85 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 SSBP1Q04837 148 aaKnown RBP0.78□□□□□ -2.28
SMC4-218ENST00000486711 ZNF56Q15929 161 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 SCIMPQ6UWF3 145 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 ZNF720Q7Z2F6 126 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 C5orf56Q8N8D9 126 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 S100A13Q99584 98 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 HLA-DRB4X5D2U9 266 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 TMEM2Q9UHN6 1383 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 IQSEC2Q5JU85 1478 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 C1orf167Q5SNV9 1468 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 BCL9LQ86UU0 1499 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 PXDNQ92626 1479 aa0.78□□□□□ -2.28
SMC4-218ENST00000486711 DIP2CQ9Y2E4 1556 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 TMEM131LA2VDJ0 1609 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 PIK3C2BO00750 1634 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 MYOM1P52179 1685 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.29
SMC4-218ENST00000486711 RGPD1P0DJD0 1748 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 MON2Q7Z3U7 1717 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 NALCNQ8IZF0 1738 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.78□□□□□ -2.29
SMC4-218ENST00000486711 PARP4Q9UKK3 1724 aaKnown RBP0.78□□□□□ -2.29
SMC4-218ENST00000486711 SCN11AQ9UI33 1791 aa0.78□□□□□ -2.29
SMC4-218ENST00000486711 MYH7P12883 1935 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 MYH6P13533 1939 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
SMC4-218ENST00000486711 TRAV17A0A0B4J275 112 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 NBDYA0A0U1RRE5 68 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 A0A1B0GW64 132 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 LINC01549A6NIU2 74 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 APOC4-APOC2K7ER74 178 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 PDCD5O14737 125 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 APOC2P02655 101 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 CD3DP04234 171 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 TSPAN19P0C672 248 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 GNG2P59768 71 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 SMCO1Q147U7 214 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 SVBPQ8N300 66 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 C1orf54Q8WWF1 131 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 TMEM203Q969S6 136 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 VPS25Q9BRG1 176 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 SCP2D1Q9UJQ7 156 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 MRC1P22897 1456 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 CD163L1Q9NR16 1453 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 SSC5DA1L4H1 1573 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 ERCC6L2Q5T890 1561 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 DIP2BQ9P265 1576 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 LRRC37A3O60309 1634 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 ALKQ9UM73 1620 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 SHPRHQ149N8 1683 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms