RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
HDAC8-218ENST00000486704 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
HDAC8-218ENST00000486704 TRAV8-3A0A0A6YYJ7 113 aa10.67□□□□□ -0.7
HDAC8-218ENST00000486704 PSCAO43653 123 aa10.67□□□□□ -0.7
HDAC8-218ENST00000486704 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
HDAC8-218ENST00000486704 DAZ4Q86SG3 579 aaKnown RBP10.67□□□□□ -0.7
HDAC8-218ENST00000486704 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.67□□□□□ -0.7
HDAC8-218ENST00000486704 EIF5A2Q9GZV4 153 aaKnown RBP10.67□□□□□ -0.7
HDAC8-218ENST00000486704 DAZ3Q9NR90 486 aaKnown RBP10.67□□□□□ -0.7
HDAC8-218ENST00000486704 URGCP-MRPS24S4R325 110 aa10.67□□□□□ -0.7
HDAC8-218ENST00000486704 LRCOL1A6NCL2 159 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 H7C1H1 209 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 M0QY20 66 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 NTF3P20783 257 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 TMEM97Q5BJF2 176 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
HDAC8-218ENST00000486704 MGPP08493 103 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 CT83Q5H943 113 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 TM2D2Q9BX73 214 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
HDAC8-218ENST00000486704 HSPG2P98160 4391 aa10.64□□□□□ -0.71
HDAC8-218ENST00000486704 A0A087WX48 190 aa10.64□□□□□ -0.71
HDAC8-218ENST00000486704 CEBPGP53567 150 aa10.64□□□□□ -0.71
HDAC8-218ENST00000486704 GTSF1Q8WW33 167 aa10.64□□□□□ -0.71
HDAC8-218ENST00000486704 A8MWL6 223 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
HDAC8-218ENST00000486704 SRP19P09132 144 aaKnown RBP10.63□□□□□ -0.71
HDAC8-218ENST00000486704 PKIAP61925 76 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 ELOBQ15370 118 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 KCNIP4Q6PIL6 250 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 TEX261Q6UWH6 196 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
HDAC8-218ENST00000486704 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
HDAC8-218ENST00000486704 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
HDAC8-218ENST00000486704 ZNF727A8MUV8 499 aa10.62□□□□□ -0.71
HDAC8-218ENST00000486704 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
HDAC8-218ENST00000486704 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
HDAC8-218ENST00000486704 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
HDAC8-218ENST00000486704 TWIST1Q15672 202 aa10.61□□□□□ -0.71
HDAC8-218ENST00000486704 ATRAIDQ6UW56 229 aa10.61□□□□□ -0.71
HDAC8-218ENST00000486704 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
HDAC8-218ENST00000486704 RMI2Q96E14 147 aa10.61□□□□□ -0.71
HDAC8-218ENST00000486704 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
HDAC8-218ENST00000486704 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
HDAC8-218ENST00000486704 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
HDAC8-218ENST00000486704 Q8N814 137 aa10.6□□□□□ -0.71
HDAC8-218ENST00000486704 FRZBQ92765 325 aa10.6□□□□□ -0.71
HDAC8-218ENST00000486704 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC8-218ENST00000486704 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 GFRA4Q9GZZ7 299 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
HDAC8-218ENST00000486704 FAM231BA6NCW3 169 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 Q0VG73 95 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 SMIM15Q7Z3B0 74 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 TSKUQ8WUA8 353 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 SMDT1Q9H4I9 107 aa10.58□□□□□ -0.72
HDAC8-218ENST00000486704 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
HDAC8-218ENST00000486704 MAPKAPK5-AS1Q8N8E1 139 aa10.57□□□□□ -0.72
HDAC8-218ENST00000486704 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
HDAC8-218ENST00000486704 IGLV5-52A0A0A0MRZ9 124 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 GCSHP23434 173 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 WFDC2Q14508 124 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 GATD1Q8NB37 220 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
HDAC8-218ENST00000486704 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 C9JQL5 133 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 CRPP02741 224 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 ANGP03950 147 aaKnown RBP10.55□□□□□ -0.72
HDAC8-218ENST00000486704 PEA15Q15121 130 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 ISOC2Q96AB3 205 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 V9GYV3 84 aa10.55□□□□□ -0.72
HDAC8-218ENST00000486704 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 RPL23P62829 140 aaKnown RBP10.54□□□□□ -0.72
HDAC8-218ENST00000486704 RBX1P62877 108 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 Q8N976 141 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 KRTAP17-1Q9BYP8 105 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 NAT8Q9UHE5 227 aa10.54□□□□□ -0.72
HDAC8-218ENST00000486704 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
HDAC8-218ENST00000486704 GAGE6Q13070 117 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 COTL1Q14019 142 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 MIAQ16674 131 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 Q8N1X5 172 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
HDAC8-218ENST00000486704 BAALCQ8WXS3 180 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms