RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TMEM14DPA8MWL7 114 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 NPFFO15130 113 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 NCR2O95944 276 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 IL5P05113 134 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 EDDM3BP56851 147 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 ALX1Q15699 326 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 SMIM21Q3B7S5 101 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 S100A7L2Q5SY68 101 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 MAFIPQ8WZ33 124 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 ANP32BQ92688 251 aaKnown RBP-0.04□□□□□ -2.42
LTN1-206ENST00000486427 PSMG3Q9BT73 122 aaPredicted RBP-0.04□□□□□ -2.42
LTN1-206ENST00000486427 RPRMQ9NS64 109 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 MYH8P13535 1937 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 G3V318 75 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 GCHFRP30047 84 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 RRAS2P62070 204 aaPredicted RBP-0.05□□□□□ -2.42
LTN1-206ENST00000486427 RPS25P62851 125 aaKnown RBP-0.05□□□□□ -2.42
LTN1-206ENST00000486427 INSL4Q14641 139 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 RPL7L1Q6DKI1 246 aaKnown RBP-0.05□□□□□ -2.42
LTN1-206ENST00000486427 SPTSSBQ8NFR3 76 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 FAM213BQ8TBF2 198 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 SDF2Q99470 211 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 WFDC6Q9BQY6 131 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 COPZ2Q9P299 210 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 ZMYM4Q5VZL5 1548 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 IFT172Q9UG01 1749 aa-0.05□□□□□ -2.42
LTN1-206ENST00000486427 TMEM2Q9UHN6 1383 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 MYH9P35579 1960 aaKnown RBP-0.06□□□□□ -2.42
LTN1-206ENST00000486427 TRAV1-2A0A0B4J238 106 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 A6NIN4 97 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 SSBP3-AS1Q7Z2R9 100 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 TPT1P8Q9HAU6 139 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 MYOM3Q5VTT5 1437 aa-0.06□□□□□ -2.42
LTN1-206ENST00000486427 ZNF292O60281 2723 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 NWD2Q9ULI1 1742 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 DOCK1Q14185 1865 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 ZNF815PA8K554 130 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 NDUFB6O95139 128 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 PIPP12273 146 aaPredicted RBP-0.07□□□□□ -2.42
LTN1-206ENST00000486427 CBLN1P23435 193 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 COPZ1P61923 177 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 UBE2DNLQ8IWF7 75 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 SPTSSAQ969W0 71 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 U3KQA8 63 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 LRRC37A3O60309 1634 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 DAPK1P53355 1430 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 PRDM2Q13029 1718 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 FLNCQ14315 2725 aa-0.07□□□□□ -2.42
LTN1-206ENST00000486427 CACNA1AO00555 2505 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 PLXNB2O15031 1838 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 BIVM-ERCC5R4GMW8 1640 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 APOC4-APOC2K7ER74 178 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 SNCGO76070 127 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 IFNA17P01571 189 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 KCNRGQ8N5I3 272 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 DPH3Q96FX2 82 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 SCP2D1Q9UJQ7 156 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 LINC00312Q9Y6C7 94 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 BICRAQ9NZM4 1560 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 FOCADQ5VW36 1801 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 PATJQ8NI35 1801 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 ZNF236Q9UL36 1845 aa-0.08□□□□□ -2.42
LTN1-206ENST00000486427 ANKRD17O75179 2603 aaKnown RBP-0.09□□□□□ -2.42
LTN1-206ENST00000486427 PHLPP1O60346 1717 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 ARAP2Q8WZ64 1704 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 CASKIN1Q8WXD9 1431 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 FAM92AA1XBS5 289 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 HIST1H1DP16402 221 aaKnown RBP-0.09□□□□□ -2.42
LTN1-206ENST00000486427 GUCA1AP43080 201 aaPredicted RBP-0.09□□□□□ -2.42
LTN1-206ENST00000486427 CCL8P80075 99 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 SMCO1Q147U7 214 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 ZNF818PQ6ZRF7 136 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 SEC11CQ9BY50 192 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 TMEM191AQ9H0A3 160 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 MYH7P12883 1935 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 MYCBP2O75592 4640 aa-0.09□□□□□ -2.42
LTN1-206ENST00000486427 PXDNQ92626 1479 aa-0.1□□□□□ -2.42
LTN1-206ENST00000486427 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.1□□□□□ -2.42
LTN1-206ENST00000486427 WNK3Q9BYP7 1800 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 FAM208BQ5VWN6 2430 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 ABCA2Q9BZC7 2435 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 TRBV10-3A0A0K0K1G6 114 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 IFITM1P13164 125 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 RBM3P98179 157 aaKnown RBP-0.1□□□□□ -2.43
LTN1-206ENST00000486427 LSM10Q969L4 123 aaKnown RBP-0.1□□□□□ -2.43
LTN1-206ENST00000486427 GRIN2AQ12879 1464 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 ZNF518AQ6AHZ1 1483 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 DOCK2Q92608 1830 aa-0.1□□□□□ -2.43
LTN1-206ENST00000486427 NCOR1O75376 2440 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 TENM4Q6N022 2769 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 SPTBN2O15020 2390 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 PTPRQQ9UMZ3 2332 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 LAMC1P11047 1609 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 HCG22E2RYF7 251 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 CFAP126Q5VTH2 177 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 Q5VV11 94 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms