RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-206ENST00000486361 ADIRFQ15847 76 aa13.35□□□□□ -0.27
LIMK1-206ENST00000486361 ISOC2Q96AB3 205 aa13.35□□□□□ -0.27
LIMK1-206ENST00000486361 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
LIMK1-206ENST00000486361 DPH3P1Q9H4G8 78 aa13.35□□□□□ -0.27
LIMK1-206ENST00000486361 RAB14P61106 215 aa13.34□□□□□ -0.27
LIMK1-206ENST00000486361 C10orf126Q8N4M7 172 aa13.34□□□□□ -0.27
LIMK1-206ENST00000486361 SMDT1Q9H4I9 107 aa13.34□□□□□ -0.27
LIMK1-206ENST00000486361 NAT8Q9UHE5 227 aa13.34□□□□□ -0.27
LIMK1-206ENST00000486361 K7EP13 123 aa13.33□□□□□ -0.28
LIMK1-206ENST00000486361 CT83Q5H943 113 aa13.33□□□□□ -0.28
LIMK1-206ENST00000486361 TSKUQ8WUA8 353 aa13.33□□□□□ -0.28
LIMK1-206ENST00000486361 V9GYV3 84 aa13.33□□□□□ -0.28
LIMK1-206ENST00000486361 IBA57-AS1B1ANH7 110 aa13.32□□□□□ -0.28
LIMK1-206ENST00000486361 DAZ4Q86SG3 579 aaKnown RBP13.32□□□□□ -0.28
LIMK1-206ENST00000486361 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
LIMK1-206ENST00000486361 C15orf54Q8N8G6 183 aa13.32□□□□□ -0.28
LIMK1-206ENST00000486361 Q9HAA7 133 aa13.32□□□□□ -0.28
LIMK1-206ENST00000486361 DAZ3Q9NR90 486 aaKnown RBP13.32□□□□□ -0.28
LIMK1-206ENST00000486361 HIGD1CA8MV81 97 aa13.31□□□□□ -0.28
LIMK1-206ENST00000486361 IFITM2Q01629 132 aa13.31□□□□□ -0.28
LIMK1-206ENST00000486361 DNAH11Q96DT5 4516 aa13.31□□□□□ -0.28
LIMK1-206ENST00000486361 TRAV26-2A0A0B4J265 109 aa13.3□□□□□ -0.28
LIMK1-206ENST00000486361 H7C1H1 209 aa13.3□□□□□ -0.28
LIMK1-206ENST00000486361 RASL11AQ6T310 242 aa13.3□□□□□ -0.28
LIMK1-206ENST00000486361 NIT1Q86X76 327 aa13.3□□□□□ -0.28
LIMK1-206ENST00000486361 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
LIMK1-206ENST00000486361 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
LIMK1-206ENST00000486361 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
LIMK1-206ENST00000486361 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
LIMK1-206ENST00000486361 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
LIMK1-206ENST00000486361 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
LIMK1-206ENST00000486361 TMEM262E9PQX1 116 aa13.28□□□□□ -0.28
LIMK1-206ENST00000486361 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
LIMK1-206ENST00000486361 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-206ENST00000486361 GATD1Q8NB37 220 aa13.28□□□□□ -0.28
LIMK1-206ENST00000486361 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
LIMK1-206ENST00000486361 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
LIMK1-206ENST00000486361 KRTAP10-2P60368 255 aa13.27□□□□□ -0.29
LIMK1-206ENST00000486361 CLLU1Q5K131 121 aa13.27□□□□□ -0.29
LIMK1-206ENST00000486361 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
LIMK1-206ENST00000486361 NIT2Q9NQR4 276 aa13.27□□□□□ -0.29
LIMK1-206ENST00000486361 URGCP-MRPS24S4R325 110 aa13.27□□□□□ -0.29
LIMK1-206ENST00000486361 A0A1B0GUT8 65 aa13.26□□□□□ -0.29
LIMK1-206ENST00000486361 FUSP35637 526 aaKnown RBP eCLIP13.26□□□□□ -0.29
LIMK1-206ENST00000486361 PKHD1P08F94 4074 aa13.26□□□□□ -0.29
LIMK1-206ENST00000486361 A0A087WX48 190 aa13.25□□□□□ -0.29
LIMK1-206ENST00000486361 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
LIMK1-206ENST00000486361 RPL39LQ96EH5 51 aaKnown RBP13.25□□□□□ -0.29
LIMK1-206ENST00000486361 CHCHD5Q9BSY4 110 aa13.25□□□□□ -0.29
LIMK1-206ENST00000486361 KLK12Q9UKR0 248 aa13.25□□□□□ -0.29
LIMK1-206ENST00000486361 A0A087WTM6 91 aa13.24□□□□□ -0.29
LIMK1-206ENST00000486361 C16orf90A8MZG2 172 aa13.24□□□□□ -0.29
LIMK1-206ENST00000486361 PSCAO43653 123 aa13.24□□□□□ -0.29
LIMK1-206ENST00000486361 GAS8-AS1O95177 125 aa13.23□□□□□ -0.29
LIMK1-206ENST00000486361 GAGE6Q13070 117 aa13.23□□□□□ -0.29
LIMK1-206ENST00000486361 KCNIP4Q6PIL6 250 aa13.23□□□□□ -0.29
LIMK1-206ENST00000486361 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
LIMK1-206ENST00000486361 MPV17L2Q567V2 206 aa13.22□□□□□ -0.29
LIMK1-206ENST00000486361 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
LIMK1-206ENST00000486361 TRBV25-1A0A075B6N4 114 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 SMIM27A0A1W2PRY6 76 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 RIGQ13278 110 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 LAGE3Q14657 143 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 ATRAIDQ6UW56 229 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 Q8N976 141 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 UBE2WQ96B02 151 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 RNF185Q96GF1 192 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 TMEM191AQ9H0A3 160 aa13.21□□□□□ -0.29
LIMK1-206ENST00000486361 TRAV8-3A0A0A6YYJ7 113 aa13.2□□□□□ -0.3
LIMK1-206ENST00000486361 EREGO14944 169 aa13.2□□□□□ -0.3
LIMK1-206ENST00000486361 AMN1Q8IY45 258 aa13.2□□□□□ -0.3
LIMK1-206ENST00000486361 IGHV1-24A0A0C4DH33 117 aa13.19□□□□□ -0.3
LIMK1-206ENST00000486361 RAB4AP20338 218 aa13.19□□□□□ -0.3
LIMK1-206ENST00000486361 IQCJQ1A5X6 159 aa13.19□□□□□ -0.3
LIMK1-206ENST00000486361 CHCHD7Q9BUK0 85 aa13.19□□□□□ -0.3
LIMK1-206ENST00000486361 LRCOL1A6NCL2 159 aa13.18□□□□□ -0.3
LIMK1-206ENST00000486361 TM2D2Q9BX73 214 aa13.18□□□□□ -0.3
LIMK1-206ENST00000486361 SMKR1H3BMG3 65 aa13.17□□□□□ -0.3
LIMK1-206ENST00000486361 ANGP03950 147 aaKnown RBP13.17□□□□□ -0.3
LIMK1-206ENST00000486361 CAMPP49913 170 aa13.17□□□□□ -0.3
LIMK1-206ENST00000486361 RBX1P62877 108 aa13.17□□□□□ -0.3
LIMK1-206ENST00000486361 ELOBQ15370 118 aa13.17□□□□□ -0.3
LIMK1-206ENST00000486361 FRZBQ92765 325 aa13.17□□□□□ -0.3
LIMK1-206ENST00000486361 IGKV2D-24A0A075B6R9 120 aa13.16□□□□□ -0.3
LIMK1-206ENST00000486361 COTL1Q14019 142 aa13.16□□□□□ -0.3
LIMK1-206ENST00000486361 ENHOQ6UWT2 76 aa13.16□□□□□ -0.3
LIMK1-206ENST00000486361 MAPKAPK5-AS1Q8N8E1 139 aa13.16□□□□□ -0.3
LIMK1-206ENST00000486361 TMEM243Q9BU79 118 aa13.16□□□□□ -0.3
LIMK1-206ENST00000486361 SDHAF1A6NFY7 115 aa13.15□□□□□ -0.3
LIMK1-206ENST00000486361 RPS10P46783 165 aaKnown RBP13.15□□□□□ -0.3
LIMK1-206ENST00000486361 WFDC2Q14508 124 aa13.15□□□□□ -0.3
LIMK1-206ENST00000486361 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
LIMK1-206ENST00000486361 LECT2O14960 151 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 NCR2O95944 276 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 AMTP48728 403 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 PKIAP61925 76 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
LIMK1-206ENST00000486361 KIAA1109Q2LD37 5005 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms