RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.12
SRGAP3-207ENST00000485983 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.12
SRGAP3-207ENST00000485983 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 PATE2Q6UY27 113 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 PRB2P02812 416 aaPredicted RBP8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 PSMB8P28062 276 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 HEATR5AQ86XA9 2040 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 LECT2O14960 151 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 CASC2Q6XLA1 102 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 Q6YL49 198 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 IGKV4-1P06312 121 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 Q8NA96 180 aa8.08□□□□□ -1.12
SRGAP3-207ENST00000485983 CSPG4Q6UVK1 2322 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 DAND5Q8N907 189 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 UNQ9165/PRO28630Q6UXU0 137 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 PDE6GP18545 87 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 MDFICQ9P1T7 246 aa8.07□□□□□ -1.12
SRGAP3-207ENST00000485983 LMO4P61968 165 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 REG3AQ06141 175 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 HELZP42694 1942 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 TMEM256-PLSCR3K7ERE1 68 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 TRBV12-3P01733 135 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 SORL1Q92673 2214 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 TRBV6-1A0A0K0K1D8 114 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 CHD3Q12873 2000 aaKnown RBP8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
SRGAP3-207ENST00000485983 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 DEFB1P60022 68 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 SPRY4Q9C004 299 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 A0A096LNI7 61 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 TRAV10A0A0B4J240 114 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 KIR2DL5BA0A0G2JN68 375 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 KIR2DL5BA0A0G2JPC4 375 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 MIFP14174 115 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 UBE2D1P51668 147 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 KIR2DL5AQ8N109 375 aa8.05□□□□□ -1.12
SRGAP3-207ENST00000485983 TANC1Q9C0D5 1861 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 C19orf84I3L1E1 186 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 Q6ZTI0 123 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 LGALS9O00182 355 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
SRGAP3-207ENST00000485983 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 FRMPD3Q5JV73 1810 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 TRBV10-2A0A0K0K1G8 114 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 LINC01548A6NM66 108 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 DEFB114Q30KQ6 69 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 PLXND1Q9Y4D7 1925 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 LY6G6DO95868 133 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
SRGAP3-207ENST00000485983 ANAPC1Q9H1A4 1944 aa8.02□□□□□ -1.12
SRGAP3-207ENST00000485983 ZFAND2AQ8N6M9 145 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 PLXNA2O75051 1894 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 ATOX1O00244 68 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 CTRLP40313 264 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 CHCHD10Q8WYQ3 142 aaPredicted RBP8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 FAM167A-AS1Q96KT0 104 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 NPSP0C0P6 89 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 DOPEY1Q5JWR5 2465 aa8.02□□□□□ -1.13
SRGAP3-207ENST00000485983 E9PLD3 99 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 Q6ZSR3 168 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 ODF3Q96PU9 254 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 NCKAP5O14513 1909 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 LY6G6CO95867 125 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 IGF1P05019 195 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 LINC00322Q6ZN03 302 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 Q6ZSV7 163 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 CCDC168Q8NDH2 2452 aa8.01□□□□□ -1.13
SRGAP3-207ENST00000485983 C10orf91Q5T1B1 145 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 UPK3BQ9BT76 320 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 BPY2O14599 106 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 Q6ZUT4 128 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 ODF3L1Q8IXM7 274 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 ODF3BA8MYP8 253 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 LINC00482Q8N8I6 264 aa8□□□□□ -1.13
SRGAP3-207ENST00000485983 H7C423 109 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 K7ERS5 55 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 IGLV2-18A0A075B6J9 118 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 LYPD6BQ8NI32 183 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 K7EQG2 157 aa7.99□□□□□ -1.13
SRGAP3-207ENST00000485983 ANKRD39Q53RE8 183 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms