RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 IGHV3-30-5P0DP03 117 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 SUMO4Q6EEV6 95 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 Q8N3U1 123 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 A0A087WWC5 75 aa9.06□□□□□ -0.96
SSR1-208ENST00000483409 M0QY20 66 aa9.06□□□□□ -0.96
SSR1-208ENST00000483409 BTF3P20290 206 aaKnown RBP9.06□□□□□ -0.96
SSR1-208ENST00000483409 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
SSR1-208ENST00000483409 TSKUQ8WUA8 353 aa9.06□□□□□ -0.96
SSR1-208ENST00000483409 V9GYV3 84 aa9.06□□□□□ -0.96
SSR1-208ENST00000483409 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
SSR1-208ENST00000483409 H7C1H1 209 aa9.05□□□□□ -0.96
SSR1-208ENST00000483409 K7EP13 123 aa9.05□□□□□ -0.96
SSR1-208ENST00000483409 IFITM2Q01629 132 aa9.05□□□□□ -0.96
SSR1-208ENST00000483409 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
SSR1-208ENST00000483409 FOXA3P55318 350 aaPredicted RBP9.04□□□□□ -0.96
SSR1-208ENST00000483409 CLLU1Q5K131 121 aa9.04□□□□□ -0.96
SSR1-208ENST00000483409 BORCS7Q96B45 105 aa9.04□□□□□ -0.96
SSR1-208ENST00000483409 GFRA4Q9GZZ7 299 aa9.04□□□□□ -0.96
SSR1-208ENST00000483409 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
SSR1-208ENST00000483409 SMIM15Q7Z3B0 74 aa9.03□□□□□ -0.96
SSR1-208ENST00000483409 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
SSR1-208ENST00000483409 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.03□□□□□ -0.96
SSR1-208ENST00000483409 Q9HAA7 133 aa9.03□□□□□ -0.96
SSR1-208ENST00000483409 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
SSR1-208ENST00000483409 TRBV6-8A0A0A6YYG3 113 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 A0A1B0GUT8 65 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 IBA57-AS1B1ANH7 110 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 DAZ4Q86SG3 579 aaKnown RBP9.02□□□□□ -0.97
SSR1-208ENST00000483409 NIT1Q86X76 327 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.97
SSR1-208ENST00000483409 DAZ3Q9NR90 486 aaKnown RBP9.02□□□□□ -0.97
SSR1-208ENST00000483409 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
SSR1-208ENST00000483409 NUP35Q8NFH5 326 aa9.01□□□□□ -0.97
SSR1-208ENST00000483409 URGCP-MRPS24S4R325 110 aa9.01□□□□□ -0.97
SSR1-208ENST00000483409 TMEM262E9PQX1 116 aa9□□□□□ -0.97
SSR1-208ENST00000483409 NIT2Q9NQR4 276 aa9□□□□□ -0.97
SSR1-208ENST00000483409 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
SSR1-208ENST00000483409 A0A087WX48 190 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 RIGQ13278 110 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 KCNIP4Q6PIL6 250 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 DEFB104AQ8WTQ1 72 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
SSR1-208ENST00000483409 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 NAT8BQ9UHF3 227 aa8.99□□□□□ -0.97
SSR1-208ENST00000483409 SMIM27A0A1W2PRY6 76 aa8.98□□□□□ -0.97
SSR1-208ENST00000483409 LAGE3Q14657 143 aa8.98□□□□□ -0.97
SSR1-208ENST00000483409 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
SSR1-208ENST00000483409 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
SSR1-208ENST00000483409 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
SSR1-208ENST00000483409 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 PSCAO43653 123 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 GAGE6Q13070 117 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 MPV17L2Q567V2 206 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 AMN1Q8IY45 258 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 KLK12Q9UKR0 248 aa8.97□□□□□ -0.97
SSR1-208ENST00000483409 A0A087WTM6 91 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 C16orf90A8MZG2 172 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 GAS8-AS1O95177 125 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 FRZBQ92765 325 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
SSR1-208ENST00000483409 EREGO14944 169 aa8.95□□□□□ -0.98
SSR1-208ENST00000483409 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
SSR1-208ENST00000483409 PNRC1Q12796 327 aaPredicted RBP8.95□□□□□ -0.98
SSR1-208ENST00000483409 Q8N976 141 aa8.95□□□□□ -0.98
SSR1-208ENST00000483409 UBE2WQ96B02 151 aa8.95□□□□□ -0.98
SSR1-208ENST00000483409 RAB4AP20338 218 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 CAMPP49913 170 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 PKIAP61925 76 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 COTL1Q14019 142 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 ELOBQ15370 118 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 MRPL54Q6P161 138 aaKnown RBP8.94□□□□□ -0.98
SSR1-208ENST00000483409 ATRAIDQ6UW56 229 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 UQCC3Q6UW78 93 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 TMEM243Q9BU79 118 aa8.94□□□□□ -0.98
SSR1-208ENST00000483409 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 SMKR1H3BMG3 65 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 PPP1R2P9O14990 202 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 NCR2O95944 276 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
SSR1-208ENST00000483409 ADCYAP1P18509 176 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 RPS10P46783 165 aaKnown RBP8.93□□□□□ -0.98
SSR1-208ENST00000483409 AMTP48728 403 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 RBX1P62877 108 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 COMMD7Q86VX2 200 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 MRAP2Q96G30 205 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 TM2D2Q9BX73 214 aa8.93□□□□□ -0.98
SSR1-208ENST00000483409 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
SSR1-208ENST00000483409 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
SSR1-208ENST00000483409 LRCOL1A6NCL2 159 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms