RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 Q8N3U1 123 aa10.58□□□□□ -0.72
GARNL3-215ENST00000478702 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
GARNL3-215ENST00000478702 NUDT10Q8NFP7 164 aa10.58□□□□□ -0.72
GARNL3-215ENST00000478702 NUDT11Q96G61 164 aa10.58□□□□□ -0.72
GARNL3-215ENST00000478702 SSTP61278 116 aa10.57□□□□□ -0.72
GARNL3-215ENST00000478702 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
GARNL3-215ENST00000478702 FRZBQ92765 325 aa10.57□□□□□ -0.72
GARNL3-215ENST00000478702 FAM210AQ96ND0 272 aa10.57□□□□□ -0.72
GARNL3-215ENST00000478702 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
GARNL3-215ENST00000478702 RPP21Q9H633 154 aaKnown RBP10.57□□□□□ -0.72
GARNL3-215ENST00000478702 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
GARNL3-215ENST00000478702 A0A087WTM6 91 aa10.56□□□□□ -0.72
GARNL3-215ENST00000478702 F2Z2F3 143 aa10.56□□□□□ -0.72
GARNL3-215ENST00000478702 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
GARNL3-215ENST00000478702 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
GARNL3-215ENST00000478702 F5H697 171 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 EREGO14944 169 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-215ENST00000478702 CEBPGP53567 150 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 Q9HAA7 133 aa10.55□□□□□ -0.72
GARNL3-215ENST00000478702 MGPP08493 103 aa10.54□□□□□ -0.72
GARNL3-215ENST00000478702 NIT1Q86X76 327 aa10.54□□□□□ -0.72
GARNL3-215ENST00000478702 TRGC1P0CF51 173 aa10.53□□□□□ -0.72
GARNL3-215ENST00000478702 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
GARNL3-215ENST00000478702 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
GARNL3-215ENST00000478702 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
GARNL3-215ENST00000478702 DNAH8Q96JB1 4490 aa10.52□□□□□ -0.73
GARNL3-215ENST00000478702 SRP19P09132 144 aaKnown RBP10.52□□□□□ -0.73
GARNL3-215ENST00000478702 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
GARNL3-215ENST00000478702 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.73
GARNL3-215ENST00000478702 CHCHD7Q9BUK0 85 aa10.52□□□□□ -0.73
GARNL3-215ENST00000478702 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
GARNL3-215ENST00000478702 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.73
GARNL3-215ENST00000478702 TRBV6-8A0A0A6YYG3 113 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 H7C1H1 209 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 M0QY20 66 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 PSCAO43653 123 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 HAMPP81172 84 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 CT83Q5H943 113 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 TEX261Q6UWH6 196 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 URGCP-MRPS24S4R325 110 aa10.51□□□□□ -0.73
GARNL3-215ENST00000478702 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
GARNL3-215ENST00000478702 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
GARNL3-215ENST00000478702 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
GARNL3-215ENST00000478702 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
GARNL3-215ENST00000478702 NTF3P20783 257 aa10.5□□□□□ -0.73
GARNL3-215ENST00000478702 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
GARNL3-215ENST00000478702 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-215ENST00000478702 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
GARNL3-215ENST00000478702 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
GARNL3-215ENST00000478702 A0A087WX48 190 aa10.48□□□□□ -0.73
GARNL3-215ENST00000478702 GCSHP23434 173 aa10.48□□□□□ -0.73
GARNL3-215ENST00000478702 TWIST1Q15672 202 aa10.48□□□□□ -0.73
GARNL3-215ENST00000478702 RASL11AQ6T310 242 aa10.48□□□□□ -0.73
GARNL3-215ENST00000478702 TM2D2Q9BX73 214 aa10.48□□□□□ -0.73
GARNL3-215ENST00000478702 A8MWL6 223 aa10.47□□□□□ -0.73
GARNL3-215ENST00000478702 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
GARNL3-215ENST00000478702 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
GARNL3-215ENST00000478702 PKIAP61925 76 aa10.46□□□□□ -0.73
GARNL3-215ENST00000478702 ELOBQ15370 118 aa10.46□□□□□ -0.73
GARNL3-215ENST00000478702 MPV17L2Q567V2 206 aa10.46□□□□□ -0.73
GARNL3-215ENST00000478702 KCNIP4Q6PIL6 250 aa10.46□□□□□ -0.73
GARNL3-215ENST00000478702 OSTCQ9NRP0 149 aa10.46□□□□□ -0.73
GARNL3-215ENST00000478702 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
GARNL3-215ENST00000478702 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-215ENST00000478702 FAM74A3Q4VXF1 159 aa10.45□□□□□ -0.74
GARNL3-215ENST00000478702 Q8N814 137 aa10.45□□□□□ -0.74
GARNL3-215ENST00000478702 RMI2Q96E14 147 aa10.45□□□□□ -0.74
GARNL3-215ENST00000478702 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
GARNL3-215ENST00000478702 TRBV25-1A0A075B6N4 114 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 C9JQL5 133 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 WFDC2Q14508 124 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 IQCJQ1A5X6 159 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 ATRAIDQ6UW56 229 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-215ENST00000478702 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 PGLYRP4Q96LB8 373 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 NIT2Q9NQR4 276 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 COX11Q9Y6N1 276 aa10.44□□□□□ -0.74
GARNL3-215ENST00000478702 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 SRSF3P84103 164 aaKnown RBP10.43□□□□□ -0.74
GARNL3-215ENST00000478702 PEA15Q15121 130 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 SMIM15Q7Z3B0 74 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 ISOC2Q96AB3 205 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 SMDT1Q9H4I9 107 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 V9GYV3 84 aa10.43□□□□□ -0.74
GARNL3-215ENST00000478702 IGKV2D-24A0A075B6R9 120 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 FAM231BA6NCW3 169 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
GARNL3-215ENST00000478702 TMEM241Q24JQ0 296 aa10.42□□□□□ -0.74
GARNL3-215ENST00000478702 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms