RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 C16orf90A8MZG2 172 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 FXYD2P54710 66 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 FXYD7P58549 80 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 RBM3P98179 157 aaKnown RBP2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 ZNF791Q3KP31 576 aaPredicted RBP2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 C9orf66Q5T8R8 295 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 REG3GQ6UW15 175 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 Q6ZS52 159 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 LINC00269Q8N2A0 174 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 CHCHD1Q96BP2 118 aaKnown RBP2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 TMEM141Q96I45 108 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 TIMM21Q9BVV7 248 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 FGF22Q9HCT0 170 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 CMC2Q9NRP2 79 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 ABRACLQ9P1F3 81 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 HILPDAQ9Y5L2 63 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 EXPH5Q8NEV8 1989 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 SNRNP200O75643 2136 aaKnown RBP2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 CFAP47Q6ZTR5 3102 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 FRYQ5TBA9 3013 aa2.39□□□□□ -2.03
FNDC3B-209ENST00000478016 SPEGQ15772 3267 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 CHD8Q9HCK8 2581 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 IGLV8-61A0A075B6I0 122 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 TRBV7-1A0A0A6YYK4 115 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 IGHV3-21A0A0B4J1V1 117 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 CRYM-AS1A6NIL9 109 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 C17orf51A8MQB3 221 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 SLC25A20O43772 301 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 IGHV3-23P01764 117 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 ZNF56Q15929 161 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 Q8NDZ9 215 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 DYNLRB2Q8TF09 96 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 FAM167A-AS1Q96KT0 104 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 FGF23Q9GZV9 251 aaPredicted RBP2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 NDUFA12Q9UI09 145 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 USP24Q9UPU5 2620 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 SPTBN2O15020 2390 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 PCNX2A6NKB5 2137 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 KIAA1549LQ6ZVL6 1849 aa2.38□□□□□ -2.03
FNDC3B-209ENST00000478016 MAP1BP46821 2468 aaKnown RBP2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 KMT2BQ9UMN6 2715 aaPredicted RBP2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 CEP295Q9C0D2 2601 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 IGLV3-32A0A0A0MS00 114 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 A0A0B4J2C4 111 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 H3BMM0 161 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 HCRTO43612 131 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 IL4P05112 153 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 HMGN2P05204 90 aaKnown RBP2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 MIAQ16674 131 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 C14orf177Q52M58 125 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 C2orf83Q53S99 150 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 RNASE13Q5GAN3 156 aaKnown RBP2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 NCBP2-AS2Q69YL0 99 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 C2orf66Q6UXQ4 117 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 FAM223AQ8IWN6 122 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 UBE2WQ96B02 151 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 ZNF414Q96IQ9 312 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 CHCHD7Q9BUK0 85 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 PHLDA3Q9Y5J5 127 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 ARL2-SNX15V9GYD0 113 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 ACACBO00763 2458 aa2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 PTPRZ1P23471 2315 aaPredicted RBP2.37□□□□□ -2.03
FNDC3B-209ENST00000478016 IGF2RP11717 2491 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 LAMA1P25391 3075 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 TANC2Q9HCD6 1990 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 TRAV7A0A075B6U4 112 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 IGKV3D-15A0A087WSY6 115 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 IGHV3-66A0A0C4DH42 116 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 TRBV10-2A0A0K0K1G8 114 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 A0A1B0GWA3 101 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 ERC2-IT1O76042 136 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 MIFP14174 115 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 UBE2D1P51668 147 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 ZNF117Q03924 483 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 Q6JHZ5 121 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 FAM19A2Q8N3H0 131 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 Q8N814 137 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 RETNLBQ9BQ08 111 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 FAM103A1Q9BTL3 118 aaKnown RBP2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 TTTY13Q9BZ97 58 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 GFRA4Q9GZZ7 299 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 RPP21Q9H633 154 aaKnown RBP2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 CCL26Q9Y258 94 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 MYO16Q9Y6X6 1858 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 AGRNO00468 2067 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 FREM2Q5SZK8 3169 aa2.36□□□□□ -2.03
FNDC3B-209ENST00000478016 DSCAMO60469 2012 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 CELSR3Q9NYQ7 3312 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 ANKRD12Q6UB98 2062 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms