RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ARMS2P0C7Q2 107 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 CACNG7P62955 275 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 RIGQ13278 110 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 RASL11AQ6T310 242 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 OR10AG1Q8NH19 301 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
SMARCB1-206ENST00000477836 MUC21A0A0G2JKD1 596 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 M0R381 172 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 MT-ND6P03923 174 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 CAMPP49913 170 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 RAB4BP61018 213 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 COX19Q49B96 90 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 SPANXN1Q5VSR9 72 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 WDR73Q6P4I2 378 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 TMEM263Q8WUH6 116 aaKnown RBP6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 C9orf85Q96MD7 179 aa6.59□□□□□ -1.35
SMARCB1-206ENST00000477836 SNURFLB1AK76 121 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 SIVA1O15304 175 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 NXPH4O95158 308 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 RPS10P46783 165 aaKnown RBP6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 TWIST1Q15672 202 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 RNASE8Q8TDE3 154 aaKnown RBP6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
SMARCB1-206ENST00000477836 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 HLA-DQA1P01909 254 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 TRGC1P0CF51 173 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 AZU1P20160 251 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 SSTP61278 116 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 ZNF493Q6ZR52 646 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 TMEM136Q6ZRR5 245 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 GSN-AS1Q9NRJ2 163 aa6.57□□□□□ -1.36
SMARCB1-206ENST00000477836 M0R2P5 195 aa6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 NTF3P20783 257 aa6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 GATD1Q8NB37 220 aa6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 SPXQ9BT56 116 aa6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 MRPL18Q9H0U6 180 aaKnown RBP6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
SMARCB1-206ENST00000477836 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
SMARCB1-206ENST00000477836 ZNF876PQ49A33 203 aa6.55□□□□□ -1.36
SMARCB1-206ENST00000477836 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
SMARCB1-206ENST00000477836 MSRB1Q9NZV6 116 aa6.55□□□□□ -1.36
SMARCB1-206ENST00000477836 TRGV1A0A0A0MS02 117 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 APCSP02743 223 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 TRGC2P03986 189 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 SMIM17P0DL12 118 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 HOXA5P20719 270 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 DAZ2Q13117 558 aaKnown RBP6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 DMRTA1Q5VZB9 504 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 NTN5Q8WTR8 489 aaPredicted RBP6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 PTH2Q96A98 100 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
SMARCB1-206ENST00000477836 A0A096LPF7 62 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 A8MWV9 139 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 MGPP08493 103 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 EVI2AP22794 236 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 FABP9Q0Z7S8 132 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 SLAQ13239 276 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 C14orf178Q8N769 122 aaPredicted RBP6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 DPH3P1Q9H4G8 78 aa6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 NOP10Q9NPE3 64 aaKnown RBP6.53□□□□□ -1.36
SMARCB1-206ENST00000477836 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.36
SMARCB1-206ENST00000477836 H3BNG1 76 aa6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 RHODO00212 210 aa6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 RAB5BP61020 215 aa6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 FAM74A4Q5TZK3 123 aa6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 FAM104BQ5XKR9 115 aa6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
SMARCB1-206ENST00000477836 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
SMARCB1-206ENST00000477836 A0A087WWL8 130 aa6.51□□□□□ -1.37
SMARCB1-206ENST00000477836 ZNF56Q15929 161 aa6.51□□□□□ -1.37
SMARCB1-206ENST00000477836 Q6ZTI0 123 aa6.51□□□□□ -1.37
SMARCB1-206ENST00000477836 RASL10AQ92737 203 aa6.51□□□□□ -1.37
SMARCB1-206ENST00000477836 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 GAGE12BA1L429 117 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 D6R8Y8 96 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 PHOX2AO14813 284 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 GAGE7O76087 117 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 NCR2O95944 276 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 PPBPP02775 128 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 SRIP30626 198 aa6.5□□□□□ -1.37
SMARCB1-206ENST00000477836 KIAA1644Q3SXP7 199 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms