RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DENND4CQ5VZ89 1909 aa14.21□□□□□ -0.14
VARS2-209ENST00000477288 TMEM89A2RUT3 159 aa14.21□□□□□ -0.14
VARS2-209ENST00000477288 KRTAP27-1Q3LI81 207 aa14.21□□□□□ -0.14
VARS2-209ENST00000477288 NUPR1O60356 82 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 TMEM263Q8WUH6 116 aaKnown RBP14.2□□□□□ -0.14
VARS2-209ENST00000477288 SIRPDQ9H106 197 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 CASC2Q6XLA1 102 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 CACNA1AO00555 2505 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 CRYGBP07316 175 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 PRO0255Q9UI72 69 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 UNQ9165/PRO28630Q6UXU0 137 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 EML6Q6ZMW3 1958 aa14.2□□□□□ -0.14
VARS2-209ENST00000477288 CUL9Q8IWT3 2517 aa14.19□□□□□ -0.14
VARS2-209ENST00000477288 CEMP1Q6PRD7 247 aaPredicted RBP14.19□□□□□ -0.14
VARS2-209ENST00000477288 SMIM20Q8N5G0 67 aa14.19□□□□□ -0.14
VARS2-209ENST00000477288 WFDC2Q14508 124 aa14.19□□□□□ -0.14
VARS2-209ENST00000477288 TRAV26-1A0A087WT03 109 aa14.19□□□□□ -0.14
VARS2-209ENST00000477288 MAP6D1Q9H9H5 199 aa14.19□□□□□ -0.14
VARS2-209ENST00000477288 A6NDX4 124 aa14.18□□□□□ -0.14
VARS2-209ENST00000477288 TMEM256-PLSCR3K7ERE1 68 aa14.18□□□□□ -0.14
VARS2-209ENST00000477288 C11orf86A6NJI1 115 aa14.18□□□□□ -0.14
VARS2-209ENST00000477288 NFE4Q86UQ8 179 aa14.17□□□□□ -0.14
VARS2-209ENST00000477288 TEN1Q86WV5 123 aa14.17□□□□□ -0.14
VARS2-209ENST00000477288 NDUFA11Q86Y39 141 aa14.16□□□□□ -0.14
VARS2-209ENST00000477288 NCKAP5O14513 1909 aa14.16□□□□□ -0.14
VARS2-209ENST00000477288 TRBV10-2A0A0K0K1G8 114 aa14.16□□□□□ -0.14
VARS2-209ENST00000477288 C14orf177Q52M58 125 aa14.16□□□□□ -0.14
VARS2-209ENST00000477288 E9PLD3 99 aa14.15□□□□□ -0.14
VARS2-209ENST00000477288 IGHV1-58A0A0C4DH39 117 aa14.15□□□□□ -0.14
VARS2-209ENST00000477288 A0A1W2PNU3 283 aaPredicted RBP14.15□□□□□ -0.14
VARS2-209ENST00000477288 IGLV1-47P01700 117 aa14.15□□□□□ -0.14
VARS2-209ENST00000477288 TDRG1Q3Y452 100 aa14.15□□□□□ -0.14
VARS2-209ENST00000477288 MED13Q9UHV7 2174 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 Q6ZUT4 128 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 A0A0J9YX75 114 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 P0DMU3 169 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 FAM231AP0DMU4 169 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 FAM231CP0DMU5 169 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 LINC00269Q8N2A0 174 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 INAFM1C9JVW0 142 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 E7EUB6 86 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 SPRY4Q9C004 299 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 KIR2DL5BA0A0G2JN68 375 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 KIR2DL5BA0A0G2JPC4 375 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 MED14OSP0DP75 135 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
VARS2-209ENST00000477288 KIR2DL5AQ8N109 375 aa14.14□□□□□ -0.15
VARS2-209ENST00000477288 FAM19A1Q7Z5A9 133 aa14.13□□□□□ -0.15
VARS2-209ENST00000477288 FAM167A-AS1Q96KT0 104 aa14.13□□□□□ -0.15
VARS2-209ENST00000477288 A0A087WZ39 114 aa14.13□□□□□ -0.15
VARS2-209ENST00000477288 SPTSSBQ8NFR3 76 aa14.13□□□□□ -0.15
VARS2-209ENST00000477288 ODF3L1Q8IXM7 274 aa14.12□□□□□ -0.15
VARS2-209ENST00000477288 TRBV6-1A0A0K0K1D8 114 aa14.12□□□□□ -0.15
VARS2-209ENST00000477288 J3KT08 172 aa14.12□□□□□ -0.15
VARS2-209ENST00000477288 LYPD6BQ8NI32 183 aa14.12□□□□□ -0.15
VARS2-209ENST00000477288 ANKHD1Q8IWZ3 2542 aaKnown RBP14.12□□□□□ -0.15
VARS2-209ENST00000477288 BRK1Q8WUW1 75 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 BPY2O14599 106 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 Q8NA96 180 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 TRAV23DV6A0A075B6W5 121 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 HILS1P60008 231 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 FOXI1Q12951 378 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 C19orf84I3L1E1 186 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 WISP2O76076 250 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 TP53TG3Q9ULZ0 132 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 NACAE9PAV3 2078 aa14.11□□□□□ -0.15
VARS2-209ENST00000477288 REG3AQ06141 175 aa14.1□□□□□ -0.15
VARS2-209ENST00000477288 TNRC6BQ9UPQ9 1833 aaKnown RBP14.1□□□□□ -0.15
VARS2-209ENST00000477288 Q6ZSR3 168 aa14.1□□□□□ -0.15
VARS2-209ENST00000477288 UPK3BQ9BT76 320 aa14.1□□□□□ -0.15
VARS2-209ENST00000477288 CRYGDP07320 174 aa14.1□□□□□ -0.15
VARS2-209ENST00000477288 PLCE1Q9P212 2302 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 TNFRSF13BO14836 293 aaPredicted RBP14.09□□□□□ -0.15
VARS2-209ENST00000477288 PRORYQ9H606 182 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 IGHV4-31P0DP07 118 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 CTRLP40313 264 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 FAM222AQ5U5X8 452 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 C20orf203Q8NBC4 194 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 PLXNB3Q9ULL4 1909 aa14.09□□□□□ -0.15
VARS2-209ENST00000477288 Q6ZTI0 123 aa14.08□□□□□ -0.15
VARS2-209ENST00000477288 KIF26AQ9ULI4 1882 aaPredicted RBP14.08□□□□□ -0.15
VARS2-209ENST00000477288 DEFB131BA0A096LNP1 70 aa14.08□□□□□ -0.16
VARS2-209ENST00000477288 HIGD1BQ9P298 99 aa14.08□□□□□ -0.16
VARS2-209ENST00000477288 LRRC75A-AS1Q8N1F1 130 aa14.08□□□□□ -0.16
VARS2-209ENST00000477288 ZFAND2AQ8N6M9 145 aa14.08□□□□□ -0.16
VARS2-209ENST00000477288 FBXL19-AS1Q494R0 122 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 PTH2Q96A98 100 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 SCXQ7RTU7 201 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 USP17L23D6RBM5 183 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 UFSP1Q6NVU6 142 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 IGKV1D-37A0A075B6S9 117 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 ODF1Q14990 250 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 MSMPQ1L6U9 139 aa14.07□□□□□ -0.16
VARS2-209ENST00000477288 LINC01548A6NM66 108 aa14.06□□□□□ -0.16
VARS2-209ENST00000477288 PLA2G5P39877 138 aa14.06□□□□□ -0.16
VARS2-209ENST00000477288 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.06□□□□□ -0.16
VARS2-209ENST00000477288 H3BT86 120 aa14.06□□□□□ -0.16
VARS2-209ENST00000477288 CCDC140Q96MF4 163 aa14.06□□□□□ -0.16
VARS2-209ENST00000477288 TRBV10-1A0A0K0K1A3 114 aa14.05□□□□□ -0.16
VARS2-209ENST00000477288 Q6YL49 198 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms