RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 C9orf116Q5BN46 136 aaPredicted RBP0.01□□□□□ -2.41
LTN1-204ENST00000475344 SPANXN1Q5VSR9 72 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 Q6ZUT4 128 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 TSTD1Q8NFU3 115 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 MAFIPQ8WZ33 124 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 TMEM242Q9NWH2 141 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 SPEF2Q9C093 1822 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 CLPSL1A2RUU4 121 aa0□□□□□ -2.41
LTN1-204ENST00000475344 UNC13BO14795 1591 aa0□□□□□ -2.41
LTN1-204ENST00000475344 SIPA1L3O60292 1781 aaPredicted RBP0□□□□□ -2.41
LTN1-204ENST00000475344 NCR2O95944 276 aa0□□□□□ -2.41
LTN1-204ENST00000475344 APODP05090 189 aa0□□□□□ -2.41
LTN1-204ENST00000475344 PI4KAP42356 2102 aa0□□□□□ -2.41
LTN1-204ENST00000475344 SMIM21Q3B7S5 101 aa0□□□□□ -2.41
LTN1-204ENST00000475344 Q6ZRX8 168 aa0□□□□□ -2.41
LTN1-204ENST00000475344 DOPEY2Q9Y3R5 2298 aa0□□□□□ -2.41
LTN1-204ENST00000475344 NPFFO15130 113 aa-0.01□□□□□ -2.41
LTN1-204ENST00000475344 ANP32BQ92688 251 aaKnown RBP-0.01□□□□□ -2.41
LTN1-204ENST00000475344 PSMG3Q9BT73 122 aaPredicted RBP-0.01□□□□□ -2.41
LTN1-204ENST00000475344 RPRMQ9NS64 109 aa-0.01□□□□□ -2.41
LTN1-204ENST00000475344 COPZ2Q9P299 210 aa-0.01□□□□□ -2.41
LTN1-204ENST00000475344 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
LTN1-204ENST00000475344 PKD1L1Q8TDX9 2849 aa-0.01□□□□□ -2.41
LTN1-204ENST00000475344 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
LTN1-204ENST00000475344 FHAD1B1AJZ9 1412 aa-0.02□□□□□ -2.41
LTN1-204ENST00000475344 IBTKQ9P2D0 1353 aaPredicted RBP-0.02□□□□□ -2.41
LTN1-204ENST00000475344 IL5P05113 134 aa-0.02□□□□□ -2.41
LTN1-204ENST00000475344 UBE2D1P51668 147 aa-0.02□□□□□ -2.41
LTN1-204ENST00000475344 EDDM3BP56851 147 aa-0.02□□□□□ -2.41
LTN1-204ENST00000475344 RPL7L1Q6DKI1 246 aaKnown RBP-0.02□□□□□ -2.41
LTN1-204ENST00000475344 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
LTN1-204ENST00000475344 NSD1Q96L73 2696 aaPredicted RBP-0.02□□□□□ -2.41
LTN1-204ENST00000475344 MYH7P12883 1935 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 A6NIN4 97 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 TMEM14DPA8MWL7 114 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 RRAS2P62070 204 aaPredicted RBP-0.03□□□□□ -2.41
LTN1-204ENST00000475344 RPS25P62851 125 aaKnown RBP-0.03□□□□□ -2.41
LTN1-204ENST00000475344 INSL4Q14641 139 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 S100A7L2Q5SY68 101 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 SPTSSBQ8NFR3 76 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 TPT1P8Q9HAU6 139 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 CHD6Q8TD26 2715 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 PKDREJQ9NTG1 2253 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 GOLGA3Q08378 1498 aa-0.03□□□□□ -2.41
LTN1-204ENST00000475344 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.42
LTN1-204ENST00000475344 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 TMEM2Q9UHN6 1383 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 ANKRD17O75179 2603 aaKnown RBP-0.04□□□□□ -2.42
LTN1-204ENST00000475344 GCHFRP30047 84 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 COPZ1P61923 177 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 FAM213BQ8TBF2 198 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 SDF2Q99470 211 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 WFDC6Q9BQY6 131 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 PLXNB2O15031 1838 aa-0.04□□□□□ -2.42
LTN1-204ENST00000475344 SPTBN1Q01082 2364 aaKnown RBP-0.04□□□□□ -2.42
LTN1-204ENST00000475344 PIPP12273 146 aaPredicted RBP-0.05□□□□□ -2.42
LTN1-204ENST00000475344 SCIMPQ6UWF3 145 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 SPTSSAQ969W0 71 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 ZMYM4Q5VZL5 1548 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 CACNA1AO00555 2505 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 IFT172Q9UG01 1749 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 DOCK1Q14185 1865 aa-0.05□□□□□ -2.42
LTN1-204ENST00000475344 HMCN2Q8NDA2 5059 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 G3V318 75 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 SNCGO76070 127 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 IFNA17P01571 189 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 CBLN1P23435 193 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 SSBP3-AS1Q7Z2R9 100 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 U3KQA8 63 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 VWFP04275 2813 aa-0.06□□□□□ -2.42
LTN1-204ENST00000475344 NWD2Q9ULI1 1742 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 PIEZO2Q9H5I5 2752 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 PATJQ8NI35 1801 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 WNK3Q9BYP7 1800 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 TRAV1-2A0A0B4J238 106 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 ZNF815PA8K554 130 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 NDUFB6O95139 128 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 GUCA1AP43080 201 aaPredicted RBP-0.07□□□□□ -2.42
LTN1-204ENST00000475344 KCNRGQ8N5I3 272 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 LINC00312Q9Y6C7 94 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 USF3Q68DE3 2245 aa-0.07□□□□□ -2.42
LTN1-204ENST00000475344 DOCK2Q92608 1830 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 APOC4-APOC2K7ER74 178 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 SMCO1Q147U7 214 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 ZNF818PQ6ZRF7 136 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 UBE2DNLQ8IWF7 75 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 DPH3Q96FX2 82 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 SCP2D1Q9UJQ7 156 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 DAPK1P53355 1430 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 PRDM2Q13029 1718 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 PTPN13Q12923 2485 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 MUC12Q9UKN1 5478 aa-0.08□□□□□ -2.42
LTN1-204ENST00000475344 FAT2Q9NYQ8 4349 aa-0.09□□□□□ -2.42
LTN1-204ENST00000475344 SEC11CQ9BY50 192 aa-0.09□□□□□ -2.42
LTN1-204ENST00000475344 TMEM191AQ9H0A3 160 aa-0.09□□□□□ -2.42
LTN1-204ENST00000475344 GVINP1Q7Z2Y8 2422 aa-0.09□□□□□ -2.42
LTN1-204ENST00000475344 FOCADQ5VW36 1801 aa-0.1□□□□□ -2.43
LTN1-204ENST00000475344 FAM92AA1XBS5 289 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms