RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 GFRA4Q9GZZ7 299 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 PKD1P98161 4303 aa4.63□□□□□ -1.67
HDAC1-205ENST00000472928 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
HDAC1-205ENST00000472928 IGKV3D-20A0A0C4DH25 116 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 GRIFINA4D1Z8 144 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 H3BVH4 76 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 INSP01308 110 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 RPL35AP18077 110 aaKnown RBP4.62□□□□□ -1.67
HDAC1-205ENST00000472928 VAMP3Q15836 100 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 PMCHL1Q16048 86 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 COX19Q49B96 90 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 NIT1Q86X76 327 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 DEFB125Q8N687 156 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 FER1L6-AS1Q8NA97 138 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 NUP35Q8NFH5 326 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 GTSF1Q8WW33 167 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 BORCS7Q96B45 105 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 TP53TG3Q9ULZ0 132 aa4.62□□□□□ -1.67
HDAC1-205ENST00000472928 MUC21A0A0G2JKD1 596 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 MUC21A0A140T8X8 626 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 FAM231BA6NCW3 169 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 NUPR2A6NF83 97 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 SERF1AO75920 110 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 ARMS2P0C7Q2 107 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 IGLC6P0CF74 106 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 RBMY1A1P0DJD3 496 aaKnown RBP4.61□□□□□ -1.67
HDAC1-205ENST00000472928 RBMY1CP0DJD4 496 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 ASIPP42127 132 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
HDAC1-205ENST00000472928 HBBP68871 147 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 RBMY1FQ15415 496 aaKnown RBP4.61□□□□□ -1.67
HDAC1-205ENST00000472928 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
HDAC1-205ENST00000472928 LYZL1Q6UWQ5 148 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 ATP5L2Q7Z4Y8 100 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 SAMD10Q9BYL1 202 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 XCL2Q9UBD3 114 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 TIMM8BQ9Y5J9 83 aaPredicted RBP4.61□□□□□ -1.67
HDAC1-205ENST00000472928 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
HDAC1-205ENST00000472928 IGHV1OR15-1A0A075B7D0 117 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 A0A1B0GVY2 172 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 A0A1B0GXF2 115 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 SNURFLB1AK76 121 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 TAX1BP3O14907 124 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 CRXO43186 299 aaPredicted RBP4.6□□□□□ -1.67
HDAC1-205ENST00000472928 ZNF324O75467 553 aaPredicted RBP4.6□□□□□ -1.67
HDAC1-205ENST00000472928 S100A4P26447 101 aaKnown RBP4.6□□□□□ -1.67
HDAC1-205ENST00000472928 HINT1P49773 126 aaPredicted RBP4.6□□□□□ -1.67
HDAC1-205ENST00000472928 RIGQ13278 110 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 OR10J3Q5JRS4 329 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 BAGE3Q86Y29 109 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 OVOL2Q9BRP0 275 aa4.6□□□□□ -1.67
HDAC1-205ENST00000472928 IGHV3OR16-12A0A075B7B8 117 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 A0A1B0GV72 72 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 MT-ND6P03923 174 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 SMIM17P0DL12 118 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 CAMPP49913 170 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 KRTDAPP60985 99 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 LGALS9CQ6DKI2 356 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 MORN3Q6PF18 240 aaPredicted RBP4.59□□□□□ -1.67
HDAC1-205ENST00000472928 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 TMEM136Q6ZRR5 245 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 ZNF575Q86XF7 245 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 OR10AG1Q8NH19 301 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
HDAC1-205ENST00000472928 IGHV3-16A0A0C4DH30 117 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 A0A0J9YWU9 116 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 A0A1B0GW15 77 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 F2Z2F3 143 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 M0R381 172 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 GNRH2O43555 120 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 SNAI2O43623 268 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 GIG44P09565 113 aaPredicted RBP4.58□□□□□ -1.68
HDAC1-205ENST00000472928 OR5AL1P0C617 328 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 RNASE3P12724 160 aaKnown RBP4.58□□□□□ -1.68
HDAC1-205ENST00000472928 HTN1P15515 57 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 FOXA3P55318 350 aaPredicted RBP4.58□□□□□ -1.68
HDAC1-205ENST00000472928 CACNG7P62955 275 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 ZNF415Q09FC8 603 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 TWIST1Q15672 202 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 SPANXN1Q5VSR9 72 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 LINC01587Q99440 93 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 PHLDA3Q9Y5J5 127 aa4.58□□□□□ -1.68
HDAC1-205ENST00000472928 APOBP04114 4563 aaKnown RBP4.58□□□□□ -1.68
HDAC1-205ENST00000472928 LOC102724200A0A096LPH7 203 aaPredicted RBP4.57□□□□□ -1.68
HDAC1-205ENST00000472928 NXPH4O95158 308 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 APCSP02743 223 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 C3orf79P0CE67 100 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 AMTP48728 403 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 SLAQ13239 276 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms