RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KIR3DP1A8MWS1 328 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 C5orf58C9J3I9 102 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 GGCTO75223 188 aaKnown RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 CST7O76096 145 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 PMP2P02689 132 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 GTF2A1P52655 376 aaPredicted RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 RPS28P62857 69 aaKnown RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 SLC35E3Q7Z769 313 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 SNX29P2Q8IUI4 249 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 Q8N814 137 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 TSLPQ969D9 159 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 MRPS24Q96EL2 167 aaKnown RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 MCEEQ96PE7 176 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 TENM3Q9P273 2699 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 LOC107984156A0A0G2JMH3 177 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 K7EP13 123 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 M0R2Z0 102 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 DLEU1O43261 78 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 IFI6P09912 130 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 TRGC1P0CF51 173 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 DSCR4P56555 118 aaPredicted RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 NCBP2-AS2Q69YL0 99 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 ARL17AQ8IVW1 177 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 LINC00471Q8N535 108 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 OR5H6Q8NGV6 325 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 CHCHD1Q96BP2 118 aaKnown RBP1.39□□□□□ -2.19
XRN1-210ENST00000472697 BPESC1Q9GZL8 116 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 BANF2Q9H503 90 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 TPT1P8Q9HAU6 139 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 MED12Q93074 2177 aa1.39□□□□□ -2.19
XRN1-210ENST00000472697 IGLV3-32A0A0A0MS00 114 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 TRAV13-1A0A0B4J241 112 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 TRBV10-2A0A0K0K1G8 114 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 ZNF705FA8MVS1 300 aaPredicted RBP1.38□□□□□ -2.19
XRN1-210ENST00000472697 ATP6V1G2-DDX39BF2Z307 99 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 K7ERU9 68 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 OR1I1O60431 355 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CRPP02741 224 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 IGKV3-11P04433 115 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 ZNF345Q14585 488 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 SCGB2B2Q4G0G5 96 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 PHF5AQ7RTV0 110 aaKnown RBP1.38□□□□□ -2.19
XRN1-210ENST00000472697 CROCCP2Q86T23 111 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 IFT20Q8IY31 132 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CLECL1Q8IZS7 167 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 LINC00311Q8N616 119 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 OR10AC1Q8NH08 325 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CLEC2BQ92478 149 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 C2orf50Q96LR7 162 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 PROK2Q9HC23 129 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 ERG28Q9UKR5 140 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 E7EQL1 145 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CD2P06729 351 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CD14P08571 375 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 AKR1D1P51857 326 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 KRTAP12-2P59991 146 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
XRN1-210ENST00000472697 PSG9Q00887 426 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 AKR1C1Q04828 323 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 KLRD1Q13241 179 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 ZNF846Q147U1 533 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 ESRGQ1W209 222 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 RPL13AP3Q6NVV1 102 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 DPPA3Q6W0C5 159 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 NDUFA11Q86Y39 141 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 WFDC9Q8NEX5 89 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 NUP35Q8NFH5 326 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 CANT1Q8WVQ1 401 aa1.38□□□□□ -2.19
XRN1-210ENST00000472697 TXNL4BQ9NX01 149 aaKnown RBP1.38□□□□□ -2.19
XRN1-210ENST00000472697 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 TRAV40A0A0B4J280 105 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 GRIFINA4D1Z8 144 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 TMEM235A6NFC5 223 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 IBA57-AS1B1ANH7 110 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 ZNF25P17030 456 aaPredicted RBP1.37□□□□□ -2.19
XRN1-210ENST00000472697 CD24P25063 80 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 FAM19A2Q8N3H0 131 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 ISOC1Q96CN7 298 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 SLC50A1Q9BRV3 221 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 COMMD3Q9UBI1 195 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 FAT4Q6V0I7 4981 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 IGHV1-58A0A0C4DH39 117 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 C9orf170A2RU37 121 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 G3V3Q6 166 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 KRTAP10-5P60370 271 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 CLLU1Q5K131 121 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 GLIPR1L1Q6UWM5 242 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 C15orf53Q8NAA6 179 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 DIRC1Q969H9 104 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 PRELID3AQ96N28 172 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 DYNLRB1Q9NP97 96 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 CALML5Q9NZT1 146 aa1.37□□□□□ -2.19
XRN1-210ENST00000472697 LSM2Q9Y333 95 aaKnown RBP1.37□□□□□ -2.19
XRN1-210ENST00000472697 A0A096LPI6 279 aa1.36□□□□□ -2.19
XRN1-210ENST00000472697 K7EIL1 84 aa1.36□□□□□ -2.19
XRN1-210ENST00000472697 NPFFO15130 113 aa1.36□□□□□ -2.19
XRN1-210ENST00000472697 SCTP09683 121 aa1.36□□□□□ -2.19
XRN1-210ENST00000472697 SLC25A4P12235 298 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms