RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 MRAP2Q96G30 205 aa15.93■□□□□ 0.14
SREBF1-208ENST00000469356 NIT2Q9NQR4 276 aa15.93■□□□□ 0.14
SREBF1-208ENST00000469356 PPP1R17O96001 155 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 RAB4AP20338 218 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 COX19Q49B96 90 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 AMN1Q8IY45 258 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 GATD1Q8NB37 220 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 NEXN-AS1Q8NBZ9 246 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 URGCP-MRPS24S4R325 110 aa15.92■□□□□ 0.14
SREBF1-208ENST00000469356 LY6G6CO95867 125 aa15.91■□□□□ 0.14
SREBF1-208ENST00000469356 LINC00476Q8WZB0 136 aa15.91■□□□□ 0.14
SREBF1-208ENST00000469356 PLECQ15149 4684 aaKnown RBP15.9■□□□□ 0.14
SREBF1-208ENST00000469356 TENM2Q9NT68 2774 aa15.9■□□□□ 0.14
SREBF1-208ENST00000469356 TIRAPP58753 221 aa15.9■□□□□ 0.14
SREBF1-208ENST00000469356 LYPD5Q6UWN5 251 aa15.9■□□□□ 0.14
SREBF1-208ENST00000469356 GTSF1LQ9H1H1 148 aa15.9■□□□□ 0.14
SREBF1-208ENST00000469356 ESRGQ1W209 222 aa15.89■□□□□ 0.13
SREBF1-208ENST00000469356 RNF185Q96GF1 192 aa15.89■□□□□ 0.13
SREBF1-208ENST00000469356 UBE2D3P61077 147 aa15.88■□□□□ 0.13
SREBF1-208ENST00000469356 UBE2D2P62837 147 aa15.88■□□□□ 0.13
SREBF1-208ENST00000469356 TMEM97Q5BJF2 176 aa15.88■□□□□ 0.13
SREBF1-208ENST00000469356 DAZ4Q86SG3 579 aaKnown RBP15.88■□□□□ 0.13
SREBF1-208ENST00000469356 DAZ3Q9NR90 486 aaKnown RBP15.88■□□□□ 0.13
SREBF1-208ENST00000469356 PPBPP02775 128 aa15.87■□□□□ 0.13
SREBF1-208ENST00000469356 LINC00694P0DN24 101 aa15.87■□□□□ 0.13
SREBF1-208ENST00000469356 MRPS16Q9Y3D3 137 aaKnown RBP15.87■□□□□ 0.13
SREBF1-208ENST00000469356 TRAV26-2A0A0B4J265 109 aa15.86■□□□□ 0.13
SREBF1-208ENST00000469356 CKS2P33552 79 aa15.86■□□□□ 0.13
SREBF1-208ENST00000469356 OR10J3Q5JRS4 329 aa15.86■□□□□ 0.13
SREBF1-208ENST00000469356 SMCO4Q9NRQ5 59 aa15.86■□□□□ 0.13
SREBF1-208ENST00000469356 LINC00588Q9Y4M8 146 aa15.86■□□□□ 0.13
SREBF1-208ENST00000469356 LCE6AA0A183 80 aa15.85■□□□□ 0.13
SREBF1-208ENST00000469356 MRPL51Q4U2R6 128 aaKnown RBP15.85■□□□□ 0.13
SREBF1-208ENST00000469356 Q9UF83 564 aa15.85■□□□□ 0.13
SREBF1-208ENST00000469356 TRAV8-6A0A0B4J262 113 aa15.84■□□□□ 0.13
SREBF1-208ENST00000469356 UPK3BQ9BT76 320 aa15.84■□□□□ 0.13
SREBF1-208ENST00000469356 HLA-DQA1P01909 254 aa15.83■□□□□ 0.12
SREBF1-208ENST00000469356 LELP1Q5T871 98 aa15.83■□□□□ 0.12
SREBF1-208ENST00000469356 ATRAIDQ6UW56 229 aa15.83■□□□□ 0.12
SREBF1-208ENST00000469356 GNB1LQ9BYB4 327 aa15.83■□□□□ 0.12
SREBF1-208ENST00000469356 ST20Q9HBF5 79 aa15.83■□□□□ 0.12
SREBF1-208ENST00000469356 TRBV6-5A0A0K0K1A5 114 aa15.82■□□□□ 0.12
SREBF1-208ENST00000469356 MT-ND6P03923 174 aa15.82■□□□□ 0.12
SREBF1-208ENST00000469356 ELOBQ15370 118 aa15.82■□□□□ 0.12
SREBF1-208ENST00000469356 TRBV24-1A0A075B6N3 115 aa15.81■□□□□ 0.12
SREBF1-208ENST00000469356 ORMDL3Q8N138 153 aa15.81■□□□□ 0.12
SREBF1-208ENST00000469356 RPL39LQ96EH5 51 aaKnown RBP15.81■□□□□ 0.12
SREBF1-208ENST00000469356 TMEM136Q6ZRR5 245 aa15.8■□□□□ 0.12
SREBF1-208ENST00000469356 PHOX2AO14813 284 aa15.79■□□□□ 0.12
SREBF1-208ENST00000469356 S100A1P23297 94 aa15.79■□□□□ 0.12
SREBF1-208ENST00000469356 LAMTOR2Q9Y2Q5 125 aa15.79■□□□□ 0.12
SREBF1-208ENST00000469356 IGHV3-38A0A0C4DH36 116 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 SDHAF1A6NFY7 115 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 D6R8Y8 96 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 SMKR1H3BMG3 65 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 NCR2O95944 276 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 PMCHP20382 165 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 COTL1Q14019 142 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 C20orf78Q9BR46 151 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 Q9H8V8 135 aa15.78■□□□□ 0.12
SREBF1-208ENST00000469356 ALMS1Q8TCU4 4167 aa15.77■□□□□ 0.12
SREBF1-208ENST00000469356 SIVA1O15304 175 aa15.77■□□□□ 0.12
SREBF1-208ENST00000469356 APCSP02743 223 aa15.77■□□□□ 0.12
SREBF1-208ENST00000469356 TRBV6-8A0A0A6YYG3 113 aa15.76■□□□□ 0.11
SREBF1-208ENST00000469356 TGIF2-C20orf24A0A0A6YYL0 155 aa15.76■□□□□ 0.11
SREBF1-208ENST00000469356 PKIAP61925 76 aa15.76■□□□□ 0.11
SREBF1-208ENST00000469356 PRELID3AQ96N28 172 aa15.76■□□□□ 0.11
SREBF1-208ENST00000469356 TRBV25-1A0A075B6N4 114 aa15.75■□□□□ 0.11
SREBF1-208ENST00000469356 I3L3M4 83 aa15.75■□□□□ 0.11
SREBF1-208ENST00000469356 VCYO14598 125 aa15.75■□□□□ 0.11
SREBF1-208ENST00000469356 TNFRSF6BO95407 300 aa15.75■□□□□ 0.11
SREBF1-208ENST00000469356 SUMO2P61956 95 aaKnown RBP15.75■□□□□ 0.11
SREBF1-208ENST00000469356 NRACQ8N912 160 aa15.75■□□□□ 0.11
SREBF1-208ENST00000469356 TRAV9-2A0A087WT02 112 aa15.74■□□□□ 0.11
SREBF1-208ENST00000469356 IGHV1-24A0A0C4DH33 117 aa15.74■□□□□ 0.11
SREBF1-208ENST00000469356 RPS10P46783 165 aaKnown RBP15.74■□□□□ 0.11
SREBF1-208ENST00000469356 CBLN2Q8IUK8 224 aa15.74■□□□□ 0.11
SREBF1-208ENST00000469356 TMEM70Q9BUB7 260 aa15.74■□□□□ 0.11
SREBF1-208ENST00000469356 K7EP13 123 aa15.73■□□□□ 0.11
SREBF1-208ENST00000469356 TCAPO15273 167 aa15.73■□□□□ 0.11
SREBF1-208ENST00000469356 GAS8-AS1O95177 125 aa15.73■□□□□ 0.11
SREBF1-208ENST00000469356 POLR2KP53803 58 aaKnown RBP15.73■□□□□ 0.11
SREBF1-208ENST00000469356 TTC32Q5I0X7 151 aa15.73■□□□□ 0.11
SREBF1-208ENST00000469356 RPL32P62910 135 aaKnown RBP15.72■□□□□ 0.11
SREBF1-208ENST00000469356 FABP9Q0Z7S8 132 aa15.72■□□□□ 0.11
SREBF1-208ENST00000469356 KIR2DL4Q99706 377 aa15.72■□□□□ 0.11
SREBF1-208ENST00000469356 MRPL18Q9H0U6 180 aaKnown RBP15.72■□□□□ 0.11
SREBF1-208ENST00000469356 TRAPPC1Q9Y5R8 145 aa15.72■□□□□ 0.11
SREBF1-208ENST00000469356 LYSTQ99698 3801 aa15.72■□□□□ 0.11
SREBF1-208ENST00000469356 TRBV27A0A0K0K1C4 114 aa15.71■□□□□ 0.11
SREBF1-208ENST00000469356 AMTP48728 403 aa15.7■□□□□ 0.1
SREBF1-208ENST00000469356 IQCJQ1A5X6 159 aa15.7■□□□□ 0.1
SREBF1-208ENST00000469356 WFDC10BQ8IUB3 73 aa15.7■□□□□ 0.1
SREBF1-208ENST00000469356 CHCHD5Q9BSY4 110 aa15.7■□□□□ 0.1
SREBF1-208ENST00000469356 MAP1LC3AQ9H492 121 aa15.7■□□□□ 0.1
SREBF1-208ENST00000469356 ATP6V1G1O75348 118 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 NPYP01303 97 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 DNAH10OSP0CZ25 163 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 FCER1GP30273 86 aa15.69■□□□□ 0.1
SREBF1-208ENST00000469356 YPEL4Q96NS1 127 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms