RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 GYPEP15421 78 aa11.52□□□□□ -0.56
LIMS2-213ENST00000469300 Q8N1Y9 231 aa11.52□□□□□ -0.57
LIMS2-213ENST00000469300 A0A096LPF7 62 aa11.52□□□□□ -0.57
LIMS2-213ENST00000469300 NDUFC2O95298 119 aa11.52□□□□□ -0.57
LIMS2-213ENST00000469300 PFN2P35080 140 aa11.52□□□□□ -0.57
LIMS2-213ENST00000469300 HERV-K104P63124 156 aa11.52□□□□□ -0.57
LIMS2-213ENST00000469300 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
LIMS2-213ENST00000469300 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 PCP2Q8IVA1 136 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 J3QQQ9 107 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 CTRLP40313 264 aa11.51□□□□□ -0.57
LIMS2-213ENST00000469300 RANBP2P49792 3224 aaKnown RBP11.51□□□□□ -0.57
LIMS2-213ENST00000469300 ANKRD39Q53RE8 183 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 SHISA2Q6UWI4 295 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 CFC1P0CG37 223 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 PLA2G2AP14555 144 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
LIMS2-213ENST00000469300 NACAE9PAV3 2078 aa11.5□□□□□ -0.57
LIMS2-213ENST00000469300 FOXI1Q12951 378 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 Q6ZSV7 163 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 MKI67P46013 3256 aaKnown RBP11.49□□□□□ -0.57
LIMS2-213ENST00000469300 IGKV2D-24A0A075B6R9 120 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 LINC01545Q5VT33 79 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 ATOX1O00244 68 aa11.49□□□□□ -0.57
LIMS2-213ENST00000469300 CRLF1O75462 422 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 RBX1P62877 108 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 BRCA2P51587 3418 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 TLN2Q9Y4G6 2542 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 SETD2Q9BYW2 2564 aaPredicted RBP11.48□□□□□ -0.57
LIMS2-213ENST00000469300 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
LIMS2-213ENST00000469300 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 K7EQG2 157 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 DEFB135Q30KP9 77 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 TRAV13-2A0A0B4J235 113 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 HAMPP81172 84 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 HHLA3Q9XRX5 114 aa11.47□□□□□ -0.57
LIMS2-213ENST00000469300 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.57
LIMS2-213ENST00000469300 SORL1Q92673 2214 aa11.46□□□□□ -0.57
LIMS2-213ENST00000469300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-213ENST00000469300 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-213ENST00000469300 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
LIMS2-213ENST00000469300 Q8N6K4 173 aa11.46□□□□□ -0.57
LIMS2-213ENST00000469300 MBD6Q96DN6 1003 aa11.46□□□□□ -0.57
LIMS2-213ENST00000469300 KLK5Q9Y337 293 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-213ENST00000469300 TNRC6AQ8NDV7 1962 aaKnown RBP11.46□□□□□ -0.57
LIMS2-213ENST00000469300 DEFB114Q30KQ6 69 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.58
LIMS2-213ENST00000469300 HIGD1BQ9P298 99 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 ANKRD11Q6UB99 2663 aaPredicted RBP11.46□□□□□ -0.58
LIMS2-213ENST00000469300 CDK2AP2O75956 126 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 XCL1P47992 114 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.58
LIMS2-213ENST00000469300 FAM236AA0A1B0GUQ0 79 aa11.45□□□□□ -0.58
LIMS2-213ENST00000469300 FAM236BA0A1B0GV22 79 aa11.45□□□□□ -0.58
LIMS2-213ENST00000469300 NXPH4O95158 308 aa11.45□□□□□ -0.58
LIMS2-213ENST00000469300 PRO0255Q9UI72 69 aa11.45□□□□□ -0.58
LIMS2-213ENST00000469300 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
LIMS2-213ENST00000469300 GATA1P15976 413 aaPredicted RBP11.44□□□□□ -0.58
LIMS2-213ENST00000469300 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
LIMS2-213ENST00000469300 LY6G6DO95868 133 aa11.44□□□□□ -0.58
LIMS2-213ENST00000469300 Q6ZQT7 251 aa11.44□□□□□ -0.58
LIMS2-213ENST00000469300 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
LIMS2-213ENST00000469300 RNF183Q96D59 192 aa11.44□□□□□ -0.58
LIMS2-213ENST00000469300 FXYD2P54710 66 aa11.43□□□□□ -0.58
LIMS2-213ENST00000469300 ZNF295-AS1Q8N0V1 137 aa11.43□□□□□ -0.58
LIMS2-213ENST00000469300 HILS1P60008 231 aa11.43□□□□□ -0.58
LIMS2-213ENST00000469300 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
LIMS2-213ENST00000469300 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
LIMS2-213ENST00000469300 CHD7Q9P2D1 2997 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 SPRY2O43597 315 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 HTTP42858 3142 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
LIMS2-213ENST00000469300 COX7A2LO14548 114 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 Q9HAA7 133 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
LIMS2-213ENST00000469300 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
LIMS2-213ENST00000469300 ZFAND3Q9H8U3 227 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 CDSNQ15517 529 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 PSMB8P28062 276 aa11.41□□□□□ -0.58
LIMS2-213ENST00000469300 A0A1B0GX51 115 aa11.4□□□□□ -0.58
LIMS2-213ENST00000469300 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
LIMS2-213ENST00000469300 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
LIMS2-213ENST00000469300 ZNF702PQ9H963 129 aa11.4□□□□□ -0.58
LIMS2-213ENST00000469300 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms