RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 C9orf163Q8N9P6 203 aa7.87□□□□□ -1.15
HDAC3-204ENST00000469207 IGLV10-54A0A075B6I4 117 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 TRBV6-1A0A0K0K1D8 114 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 A0A1B0GV50 99 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 G3V3Q6 166 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 AKR1C3P42330 323 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 RBX1P62877 108 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
HDAC3-204ENST00000469207 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
HDAC3-204ENST00000469207 MIAQ16674 131 aa7.85□□□□□ -1.15
HDAC3-204ENST00000469207 DGAT2L7PQ6IED9 249 aa7.85□□□□□ -1.15
HDAC3-204ENST00000469207 DERL1Q9BUN8 251 aa7.85□□□□□ -1.15
HDAC3-204ENST00000469207 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-204ENST00000469207 ZNF471Q9BX82 626 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-204ENST00000469207 KIF25-AS1Q9Y6Z4 181 aa7.85□□□□□ -1.15
HDAC3-204ENST00000469207 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 SMLR1H3BR10 107 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 SNAI2O43623 268 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 SLPIP03973 132 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 RAB5CP51148 216 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 SPANXN1Q5VSR9 72 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 MLST8Q9BVC4 326 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
HDAC3-204ENST00000469207 ARPC5O15511 151 aa7.83□□□□□ -1.16
HDAC3-204ENST00000469207 BAGE2Q86Y30 109 aa7.83□□□□□ -1.16
HDAC3-204ENST00000469207 VAX2Q9UIW0 290 aa7.83□□□□□ -1.16
HDAC3-204ENST00000469207 TNXBP22105 4242 aa7.83□□□□□ -1.16
HDAC3-204ENST00000469207 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
HDAC3-204ENST00000469207 GZMBP10144 247 aa7.82□□□□□ -1.16
HDAC3-204ENST00000469207 SFT2D1Q8WV19 159 aa7.82□□□□□ -1.16
HDAC3-204ENST00000469207 GFRA4Q9GZZ7 299 aa7.82□□□□□ -1.16
HDAC3-204ENST00000469207 IGLV4-60A0A075B6I1 120 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 OR5AL1P0C617 328 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 REG3AQ06141 175 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 TMUB2Q71RG4 321 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 C20orf203Q8NBC4 194 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 DPH3Q96FX2 82 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
HDAC3-204ENST00000469207 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 hDV102S1A0JD36 115 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 M0QY20 66 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 ODF1Q14990 250 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-204ENST00000469207 FAM213BQ8TBF2 198 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 MBD3L1Q8WWY6 194 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 TCEAL7Q9BRU2 100 aa7.8□□□□□ -1.16
HDAC3-204ENST00000469207 A0A087WYN8 130 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 MGPP08493 103 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 CXCL1P09341 107 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-204ENST00000469207 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 TPPP3Q9BW30 176 aa7.79□□□□□ -1.16
HDAC3-204ENST00000469207 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 S100A9P06702 114 aaKnown RBP7.78□□□□□ -1.16
HDAC3-204ENST00000469207 PKIAP61925 76 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 CCL20P78556 96 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 TMEM97Q5BJF2 176 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 SUMO4Q6EEV6 95 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 CLRN3Q8NCR9 226 aa7.78□□□□□ -1.16
HDAC3-204ENST00000469207 A0A0D9SG52 128 aa7.77□□□□□ -1.17
HDAC3-204ENST00000469207 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
HDAC3-204ENST00000469207 CNBPP62633 177 aaKnown RBP7.77□□□□□ -1.17
HDAC3-204ENST00000469207 LRP2P98164 4655 aa7.77□□□□□ -1.17
HDAC3-204ENST00000469207 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
HDAC3-204ENST00000469207 Q6ZRU5 148 aa7.77□□□□□ -1.17
HDAC3-204ENST00000469207 KCNRGQ8N5I3 272 aa7.77□□□□□ -1.17
HDAC3-204ENST00000469207 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
HDAC3-204ENST00000469207 PFDN1O60925 122 aa7.76□□□□□ -1.17
HDAC3-204ENST00000469207 IGLC6P0CF74 106 aa7.76□□□□□ -1.17
HDAC3-204ENST00000469207 IGHV3-64A0A075B6Q5 118 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 IGKV3OR2-268A0A0C4DH90 116 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 RAB19A4D1S5 217 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 PHOX2AO14813 284 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 H2AFB1P0C5Y9 115 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 FER1L6-AS1Q8NA97 138 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 OR2D3Q8NGH3 330 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
HDAC3-204ENST00000469207 TRAV8-4A0A0B4J246 113 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 P01737 135 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 COX6A2Q02221 97 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 PRSS3P2Q8NHM4 247 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 SPACA4Q8TDM5 124 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
HDAC3-204ENST00000469207 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 GAGE12HA6NDE8 117 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 CENPWQ5EE01 88 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 LYZL1Q6UWQ5 148 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 GNG13Q9P2W3 67 aa7.73□□□□□ -1.17
HDAC3-204ENST00000469207 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-204ENST00000469207 UMAD1C9J7I0 102 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 H7C1H1 209 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 NTF3P20783 257 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 LYPD6BQ8NI32 183 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 GTSF1Q8WW33 167 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms