RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ZNF705AQ6ZN79 300 aaPredicted RBP6.9□□□□□ -1.3
APOBEC1-202ENST00000467171 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
APOBEC1-202ENST00000467171 VAMP8Q9BV40 100 aa6.9□□□□□ -1.3
APOBEC1-202ENST00000467171 WFDC10AQ9H1F0 79 aa6.9□□□□□ -1.3
APOBEC1-202ENST00000467171 AGRNO00468 2067 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 LINC01549A6NIU2 74 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 ATP5LO75964 103 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 AZU1P20160 251 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 ZNF56Q15929 161 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 LGALS9BQ3B8N2 356 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 LGALS9CQ6DKI2 356 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 SPATA3Q8NHX4 192 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 IFI27L1Q96BM0 104 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
APOBEC1-202ENST00000467171 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 CYSRT1A8MQ03 144 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 TCAPO15273 167 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 PRM2P04554 102 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 CFAP126Q5VTH2 177 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 C16orf74Q96GX8 76 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 BAHCC1Q9P281 2608 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 MUC4Q99102 2169 aa6.88□□□□□ -1.31
APOBEC1-202ENST00000467171 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 CIDEAO60543 219 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 NUDT3O95989 172 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 KIR2DL5BQ8NHK3 375 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 DNAJC30Q96LL9 226 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 KIR2DL4Q99706 377 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 PRO1933Q9H354 126 aa6.87□□□□□ -1.31
APOBEC1-202ENST00000467171 IGHV3OR16-12A0A075B7B8 117 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 IGHV3-53P01767 116 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 DDTP30046 118 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 RHOHQ15669 191 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 MRPL16Q9NX20 251 aaKnown RBP6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 PAM16Q9Y3D7 125 aa6.86□□□□□ -1.31
APOBEC1-202ENST00000467171 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 PLAC8L1A1L4L8 177 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 SMIM9A6NGZ8 99 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 IGLL1P15814 213 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 ATRQ13535 2644 aa6.85□□□□□ -1.31
APOBEC1-202ENST00000467171 TRGV1A0A0A0MS02 117 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 I3L3M4 83 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 C2orf66Q6UXQ4 117 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 PRIMA1Q86XR5 153 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 C3orf56Q8N813 242 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 ZMAT5Q9UDW3 170 aaKnown RBP6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
APOBEC1-202ENST00000467171 NOTCH3Q9UM47 2321 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 HSBP1L1C9JCN9 74 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 PRSS1P07477 247 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 APOC4P55056 127 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 ODF1Q14990 250 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 Q6ZSN1 163 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 NEGR1Q7Z3B1 354 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 ERASQ7Z444 233 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 OR4C5Q8NGB2 326 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 C18orf15Q96N68 181 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 SCGB3A1Q96QR1 104 aa6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
APOBEC1-202ENST00000467171 TEP1Q99973 2627 aaKnown RBP6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 A0A087WX48 190 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 H0Y8G0 127 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 TSHBP01222 138 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 Q6ZTI0 123 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 NEXN-AS1Q8NBZ9 246 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 TIMM17AQ99595 171 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 TNFRSF18Q9Y5U5 241 aa6.82□□□□□ -1.32
APOBEC1-202ENST00000467171 DEFA6Q01524 100 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 MAJINQ3KP22 176 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 Q6ZN92 141 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 MRPL52Q86TS9 123 aaKnown RBP6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 C20orf203Q8NBC4 194 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms