RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 BAGE3Q86Y29 109 aa0.32□□□□□ -2.36
GARNL3-213ENST00000464616 FAM213BQ8TBF2 198 aa0.32□□□□□ -2.36
GARNL3-213ENST00000464616 ARL11Q969Q4 196 aa0.32□□□□□ -2.36
GARNL3-213ENST00000464616 ZNF462Q96JM2 2506 aa0.32□□□□□ -2.36
GARNL3-213ENST00000464616 MUC22E2RYF6 1773 aaPredicted RBP0.32□□□□□ -2.36
GARNL3-213ENST00000464616 MYOM3Q5VTT5 1437 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 NWD2Q9ULI1 1742 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 TRGV1A0A0A0MS02 117 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 A0A0D9SFI3 127 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 FAM25AB3EWG3 89 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 FAM25CB3EWG5 89 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 FAM25GB3EWG6 89 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 SIX6O95475 246 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 NMBP08949 121 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 SEC11CQ9BY50 192 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 RERGLQ9H628 205 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 MYH9P35579 1960 aaKnown RBP0.31□□□□□ -2.36
GARNL3-213ENST00000464616 SPEF2Q9C093 1822 aa0.31□□□□□ -2.36
GARNL3-213ENST00000464616 ABCA4P78363 2273 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 PXDNQ92626 1479 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 SIPA1L3O60292 1781 aaPredicted RBP0.3□□□□□ -2.36
GARNL3-213ENST00000464616 ARFGEF1Q9Y6D6 1849 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 SPTSSBQ8NFR3 76 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 AQP10Q96PS8 301 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 SNRNP25Q9BV90 132 aaKnown RBP0.3□□□□□ -2.36
GARNL3-213ENST00000464616 NAA60Q9H7X0 242 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 R4GMQ9 66 aa0.3□□□□□ -2.36
GARNL3-213ENST00000464616 SPINK8P0C7L1 97 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 BTG2P78543 158 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 UBE2DNLQ8IWF7 75 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 C10orf82Q8WW14 230 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 PDCD10Q9BUL8 212 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 LINC00470Q9BZP3 86 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 AGPAT4-IT1Q9H0P7 198 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 LINC00312Q9Y6C7 94 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 APCP25054 2843 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 CFTRP13569 1480 aa0.29□□□□□ -2.36
GARNL3-213ENST00000464616 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
GARNL3-213ENST00000464616 KIAA0100Q14667 2235 aaKnown RBP0.28□□□□□ -2.36
GARNL3-213ENST00000464616 S100A3P33764 101 aa0.28□□□□□ -2.36
GARNL3-213ENST00000464616 SMIM4Q8WVI0 70 aa0.28□□□□□ -2.36
GARNL3-213ENST00000464616 SERP1Q9Y6X1 66 aa0.28□□□□□ -2.36
GARNL3-213ENST00000464616 SSC5DA1L4H1 1573 aa0.28□□□□□ -2.37
GARNL3-213ENST00000464616 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 SPAARA0A1B0GVQ0 90 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 NDUFA2O43678 99 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 FGF7P21781 194 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 PPP3R2Q96LZ3 170 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 MED13LQ71F56 2210 aa0.27□□□□□ -2.37
GARNL3-213ENST00000464616 MYH8P13535 1937 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 DOCK11Q5JSL3 2073 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 CACNA1EQ15878 2313 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 TRAV13-2A0A0B4J235 113 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 TRAV1-2A0A0B4J238 106 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 HCG22E2RYF7 251 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 K7EP13 123 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 HIST1H1DP16402 221 aaKnown RBP0.26□□□□□ -2.37
GARNL3-213ENST00000464616 Q56UQ5 140 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 S100A7L2Q5SY68 101 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 Q6AWC8 147 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 CNFNQ9BYD5 112 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 ABCA1O95477 2261 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 MEGF8Q7Z7M0 2845 aa0.26□□□□□ -2.37
GARNL3-213ENST00000464616 NAV3Q8IVL0 2385 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 CLPSL1A2RUU4 121 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 EFCAB10A6NFE3 127 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 MEIG1Q5JSS6 88 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 SPANXDQ9BXN6 97 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 LENEPQ9Y5L5 61 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 MYH7P12883 1935 aa0.25□□□□□ -2.37
GARNL3-213ENST00000464616 ZNF609O15014 1411 aa0.24□□□□□ -2.37
GARNL3-213ENST00000464616 IFNGP01579 166 aa0.24□□□□□ -2.37
GARNL3-213ENST00000464616 APOC2P02655 101 aa0.24□□□□□ -2.37
GARNL3-213ENST00000464616 C8orf59Q8N0T1 100 aaPredicted RBP0.24□□□□□ -2.37
GARNL3-213ENST00000464616 CYP4F30PQ9H0H9 118 aa0.24□□□□□ -2.37
GARNL3-213ENST00000464616 U3KQA8 63 aa0.24□□□□□ -2.37
GARNL3-213ENST00000464616 CASKIN1Q8WXD9 1431 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 DOCK2Q92608 1830 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 WNK3Q9BYP7 1800 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 PPP1R17O96001 155 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 CCL18P55774 89 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 SARNPP82979 210 aaKnown RBP0.23□□□□□ -2.37
GARNL3-213ENST00000464616 C10orf128Q5T292 105 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 FAM107BQ9H098 131 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 BICRAQ9NZM4 1560 aa0.23□□□□□ -2.37
GARNL3-213ENST00000464616 GOLGA3Q08378 1498 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 PPIP5K1Q6PFW1 1433 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 PATJQ8NI35 1801 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 F5P12259 2224 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 IFT172Q9UG01 1749 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 LOC285095A0A1B0GVY8 99 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 ZNF815PA8K554 130 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 SSSCA1O60232 199 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 GNG7O60262 68 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 COX17Q14061 63 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 CFAP126Q5VTH2 177 aa0.22□□□□□ -2.37
GARNL3-213ENST00000464616 SSBP3-AS1Q7Z2R9 100 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms