RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RNASE3P12724 160 aaKnown RBP5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 TCF15Q12870 199 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 FHL3Q13643 280 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 MIAQ16674 131 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 PIK3CD-AS1Q5SR53 167 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 C5orf56Q8N8D9 126 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 AMELXQ99217 191 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 OVOL2Q9BRP0 275 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 NPFFO15130 113 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV4-39P01824 125 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 INAFM2P0DMQ5 153 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 CXCL5P42830 114 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 LINC00315P59091 139 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 SNRPD3P62318 126 aaKnown RBP5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 PRB3Q04118 309 aaPredicted RBP5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF56Q15929 161 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 PRR9Q5T870 116 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 LINC00643Q86TS7 51 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNRF2Q8NHG8 242 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF580Q9UK33 172 aa5.37□□□□□ -1.55
CLSTN1-204ENST00000464286 PTPRZ1P23471 2315 aaPredicted RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 USP9XQ93008 2570 aaPredicted RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3OR16-8A0A075B7F1 116 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 TRAV4A0A0B4J268 109 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 TINCRA0A1B0GVN0 87 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 H7C2G1 150 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 LST1O00453 97 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 IGF1P05019 195 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 PRSS2P07478 247 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 NHLRC4P0CG21 123 aaPredicted RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 PRB4P10163 310 aaPredicted RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 CD28P10747 220 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 MRPS36P82909 103 aaKnown RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 MEIG1Q5JSS6 88 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 PIMREGQ9BSJ6 248 aa5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 DAZ1Q9NQZ3 744 aaKnown RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 ASH1LQ9NR48 2969 aaKnown RBP5.36□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF292O60281 2723 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 NCOR2Q9Y618 2525 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3OR16-13A0A075B7E8 117 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-49A0A0A0MS15 119 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-74A0A0B4J1X5 117 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 TMEM89A2RUT3 159 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 H7C423 109 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 J3KRW8 73 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 M0QY20 66 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 GNRH2O43555 120 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 TRIAP1O43715 76 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-30-3P0DP02 117 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 SAA4P35542 130 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 TMEM95Q3KNT9 176 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 DNAJC30Q96LL9 226 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
CLSTN1-204ENST00000464286 IGLV4-3A0A075B6K6 122 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV1OR15-1A0A075B7D0 117 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-16A0A0C4DH30 117 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 TEX49A0A1B0GTD5 131 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 G3V318 75 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 UQCRQO14949 82 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 TGFAP01135 160 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 TRACP01848 142 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 EMP1P54849 157 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 RPL39P62891 51 aaKnown RBP5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF415Q09FC8 603 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 C11orf71Q6IPW1 123 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 RNF152Q8N8N0 203 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 DAND5Q8N907 189 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 RHPN1-AS1Q9BWJ2 59 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 PRORYQ9H606 182 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 TNFRSF18Q9Y5U5 241 aa5.34□□□□□ -1.55
CLSTN1-204ENST00000464286 ZNF462Q96JM2 2506 aa5.34□□□□□ -1.56
CLSTN1-204ENST00000464286 TIRAPP58753 221 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 FAM74A4Q5TZK3 123 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 FAM222AQ5U5X8 452 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 LINC01560Q8TB33 94 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 VSIG2Q96IQ7 327 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 BEX4Q9NWD9 120 aaPredicted RBP5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 USP24Q9UPU5 2620 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 LAMA1P25391 3075 aa5.33□□□□□ -1.56
CLSTN1-204ENST00000464286 A0A087WWL8 130 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 CCDC179H3BU77 68 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 NDUFA1O15239 70 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 GATA3P23771 443 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 HERV-K104P63124 156 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 LRRC75A-AS1Q8N1F1 130 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 SMIM20Q8N5G0 67 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 Q8NA96 180 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 PEMTQ9UBM1 199 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 TEP1Q99973 2627 aaKnown RBP5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 XIRP2A4UGR9 3374 aa5.32□□□□□ -1.56
CLSTN1-204ENST00000464286 TRAV12-3A0A0B4J271 114 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms