RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HCG22E2RYF7 251 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 NUPR1O60356 82 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 FAM213BQ8TBF2 198 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 ODF3Q96PU9 254 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 MRPL35Q9NZE8 188 aaKnown RBP1.88□□□□□ -2.11
ITGB1-208ENST00000464001 ALPK2Q86TB3 2170 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 KIAA0100Q14667 2235 aaKnown RBP1.87□□□□□ -2.11
ITGB1-208ENST00000464001 RTTNQ86VV8 2226 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 PRDM15P57071 1507 aaPredicted RBP1.87□□□□□ -2.11
ITGB1-208ENST00000464001 ARHGEF12Q9NZN5 1544 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 TRAV12-3A0A0B4J271 114 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 PIGBOS1A0A0B4J2F0 54 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 TRGV4A0A0C4DH28 118 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 H3BRM9 83 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
ITGB1-208ENST00000464001 C10orf55Q5SWW7 151 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 MED12Q93074 2177 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 TSLPQ969D9 159 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 CDC42SE1Q9NRR8 79 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 BET1LQ9NYM9 111 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 DIP2BQ9P265 1576 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 C22orf24Q9Y442 160 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 PHRF1Q9P1Y6 1649 aaKnown RBP1.87□□□□□ -2.11
ITGB1-208ENST00000464001 MAGI2Q86UL8 1455 aa1.87□□□□□ -2.11
ITGB1-208ENST00000464001 IGKV3-7A0A075B6H7 116 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 TRBV10-1A0A0K0K1A3 114 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 TRBV6-4A0A1B0GX49 114 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 NUPR2A6NF83 97 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 K7EP34 96 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 MRPS14O60783 128 aaKnown RBP1.86□□□□□ -2.11
ITGB1-208ENST00000464001 NMBP08949 121 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 GNG11P61952 73 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 FAM74A1Q5RGS3 127 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 BRD3OSQ6XYD6 125 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 C4orf3Q8WVX3 66 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 TTTY12Q9BZ98 90 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 KDM6BO15054 1643 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 LAMA4Q16363 1823 aa1.86□□□□□ -2.11
ITGB1-208ENST00000464001 PPYP01298 95 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 MYOZ3Q8TDC0 251 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 C20orf78Q9BR46 151 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 TXNDC17Q9BRA2 123 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 REG4Q9BYZ8 158 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 MRPL36Q9P0J6 103 aaKnown RBP1.85□□□□□ -2.11
ITGB1-208ENST00000464001 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 COL4A6Q14031 1691 aa1.85□□□□□ -2.11
ITGB1-208ENST00000464001 PPRC1Q5VV67 1664 aaKnown RBP1.84□□□□□ -2.11
ITGB1-208ENST00000464001 A0A0J9YY99 117 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 IGLV3-1P01715 115 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 ASIPP42127 132 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 SEC11AP67812 179 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 CCL8P80075 99 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 TDRG1Q3Y452 100 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 C15orf53Q8NAA6 179 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
ITGB1-208ENST00000464001 KIF14Q15058 1648 aa1.84□□□□□ -2.12
ITGB1-208ENST00000464001 MYO3AQ8NEV4 1616 aa1.84□□□□□ -2.12
ITGB1-208ENST00000464001 SCN7AQ01118 1682 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 UACAQ9BZF9 1416 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 ERVK-7P63135 1459 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 EPRSP07814 1512 aaKnown RBP1.83□□□□□ -2.12
ITGB1-208ENST00000464001 TRBV7-7A0A0K0K1E9 115 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 NAP1L6A6NFF2 107 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 CRYM-AS1A6NIL9 109 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 JMJD7-PLA2G4BH0Y9G9 81 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 ATOX1O00244 68 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 SIX6O95475 246 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 FAUP35544 74 aaKnown RBP1.83□□□□□ -2.12
ITGB1-208ENST00000464001 UBE2D1P51668 147 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 PEA15Q15121 130 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 HCP5Q6MZN7 132 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 LINC00299Q6ZSB3 139 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 CYP4F30PQ9H0H9 118 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 KLK9Q9UKQ9 250 aa1.83□□□□□ -2.12
ITGB1-208ENST00000464001 RRBP1Q9P2E9 1410 aaKnown RBP1.83□□□□□ -2.12
ITGB1-208ENST00000464001 SIPA1L3O60292 1781 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-208ENST00000464001 PI4KAP42356 2102 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 CDK13Q14004 1512 aaKnown RBP1.82□□□□□ -2.12
ITGB1-208ENST00000464001 TRBV7-1A0A0A6YYK4 115 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 TEX49A0A1B0GTD5 131 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 SFT2D2O95562 160 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 CYB5AP00167 134 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 GYPAP02724 150 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 KRTDAPP60985 99 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-208ENST00000464001 NDUFA11Q86Y39 141 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 MED13Q9UHV7 2174 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 BTAF1O14981 1849 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 PXDNQ92626 1479 aa1.82□□□□□ -2.12
ITGB1-208ENST00000464001 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 MAP3K4Q9Y6R4 1608 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 LTN1O94822 1766 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 DNAL4O96015 105 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 TRAPPC2P0DI81 140 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 TRAPPC2BP0DI82 140 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 PDE6GP18545 87 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 COA5Q86WW8 74 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 WFDC10AQ9H1F0 79 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms