RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 WNK2Q9Y3S1 2297 aa-0.17□□□□□ -2.44
USP9X-204ENST00000463829 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
USP9X-204ENST00000463829 PIRTP0C851 137 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 IFITM1P13164 125 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 C9orf116Q5BN46 136 aaPredicted RBP-0.18□□□□□ -2.44
USP9X-204ENST00000463829 BATF3Q9NR55 127 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 RPRMQ9NS64 109 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 GSKIPQ9P0R6 139 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 STAB2Q8WWQ8 2551 aa-0.18□□□□□ -2.44
USP9X-204ENST00000463829 COL6A3P12111 3177 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 J3QR89 54 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 M0R129 80 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 TSPAN19P0C672 248 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 EDDM3BP56851 147 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 CKS1BP61024 79 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 RPL7L1Q6DKI1 246 aaKnown RBP-0.19□□□□□ -2.44
USP9X-204ENST00000463829 SMIM3Q9BZL3 60 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 HERC1Q15751 4861 aa-0.19□□□□□ -2.44
USP9X-204ENST00000463829 TENM2Q9NT68 2774 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 SETD2Q9BYW2 2564 aaPredicted RBP-0.2□□□□□ -2.44
USP9X-204ENST00000463829 ZANQ9Y493 2812 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 EP300Q09472 2414 aaPredicted RBP-0.2□□□□□ -2.44
USP9X-204ENST00000463829 A6NIN4 97 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 NCR2O95944 276 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 IFNA17P01571 189 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 LINC00694P0DN24 101 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 UBE2DNLQ8IWF7 75 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 CTAGE3PQ8IX95 158 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 C10orf82Q8WW14 230 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 FAT3Q8TDW7 4589 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 LAMB1P07942 1786 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 NBEAL2Q6ZNJ1 2754 aa-0.2□□□□□ -2.44
USP9X-204ENST00000463829 IBTKQ9P2D0 1353 aaPredicted RBP-0.2□□□□□ -2.44
USP9X-204ENST00000463829 ABCA2Q9BZC7 2435 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 FAT1Q14517 4588 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 MUC22E2RYF6 1773 aaPredicted RBP-0.21□□□□□ -2.44
USP9X-204ENST00000463829 KMT2AQ03164 3969 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 NSD1Q96L73 2696 aaPredicted RBP-0.21□□□□□ -2.44
USP9X-204ENST00000463829 C10orf142B7Z368 130 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 M0R2Z0 102 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 KRTAP20-1Q3LI63 56 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 Q6ZUT4 128 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 PSMG3Q9BT73 122 aaPredicted RBP-0.21□□□□□ -2.44
USP9X-204ENST00000463829 CREBBPQ92793 2442 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 ARHGEF10O15013 1369 aa-0.21□□□□□ -2.44
USP9X-204ENST00000463829 ARFGEF1Q9Y6D6 1849 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 MYH6P13533 1939 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 STARD9Q9P2P6 4700 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 ZNF815PA8K554 130 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 PITX3O75364 302 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 UBE2D1P51668 147 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 UBE2G1P62253 170 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 SSBP3-AS1Q7Z2R9 100 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 LZICQ8WZA0 190 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 WFDC6Q9BQY6 131 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 RIF1Q5UIP0 2472 aaKnown RBP-0.22□□□□□ -2.44
USP9X-204ENST00000463829 DNHD1Q96M86 4753 aa-0.22□□□□□ -2.44
USP9X-204ENST00000463829 PRG4Q92954 1404 aaPredicted RBP-0.22□□□□□ -2.45
USP9X-204ENST00000463829 GOLGA3Q08378 1498 aa-0.22□□□□□ -2.45
USP9X-204ENST00000463829 SRRM2Q9UQ35 2752 aaKnown RBP-0.23□□□□□ -2.45
USP9X-204ENST00000463829 COL6A5A8TX70 2615 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 HECTD1Q9ULT8 2610 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 TRAV1-2A0A0B4J238 106 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 CLPSL1A2RUU4 121 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 ARPC5O15511 151 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 IL5P05113 134 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 PIPP12273 146 aaPredicted RBP-0.23□□□□□ -2.45
USP9X-204ENST00000463829 RRAS2P62070 204 aaPredicted RBP-0.23□□□□□ -2.45
USP9X-204ENST00000463829 LRP2P98164 4655 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 TMEM2Q9UHN6 1383 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 DAPK1P53355 1430 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 ADGRB1O14514 1584 aa-0.23□□□□□ -2.45
USP9X-204ENST00000463829 SIPA1L3O60292 1781 aaPredicted RBP-0.24□□□□□ -2.45
USP9X-204ENST00000463829 TRBV10-3A0A0K0K1G6 114 aa-0.24□□□□□ -2.45
USP9X-204ENST00000463829 G3V318 75 aa-0.24□□□□□ -2.45
USP9X-204ENST00000463829 APOC4-APOC2K7ER74 178 aa-0.24□□□□□ -2.45
USP9X-204ENST00000463829 K7ERU9 68 aa-0.24□□□□□ -2.45
USP9X-204ENST00000463829 CFDP00746 253 aaPredicted RBP-0.24□□□□□ -2.45
USP9X-204ENST00000463829 CYP4F30PQ9H0H9 118 aa-0.24□□□□□ -2.45
USP9X-204ENST00000463829 NCOR1O75376 2440 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 A0A0D9SFI3 127 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 PIN1P1O15428 100 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 SPINK8P0C7L1 97 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 CBLN1P23435 193 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 Q5VV11 94 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 SCIMPQ6UWF3 145 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 CNFNQ9BYD5 112 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 CHD8Q9HCK8 2581 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 VWFP04275 2813 aa-0.25□□□□□ -2.45
USP9X-204ENST00000463829 FHAD1B1AJZ9 1412 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 NPFFO15130 113 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 SNCGO76070 127 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 SMIM6P0DI80 62 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 ZNF818PQ6ZRF7 136 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 SPTSSBQ8NFR3 76 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 SPTSSAQ969W0 71 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 DSPP15924 2871 aaKnown RBP-0.26□□□□□ -2.45
USP9X-204ENST00000463829 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
USP9X-204ENST00000463829 ZMYM4Q5VZL5 1548 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms