RNA–Protein interactions for RNA: ENST00000463366.1

SRGAP2B-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 4

Gene SRGAP2B, Length 537 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-201ENST00000463366 NIT1Q86X76 327 aa10.39□□□□□ -0.75
SRGAP2B-201ENST00000463366 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.39□□□□□ -0.75
SRGAP2B-201ENST00000463366 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
SRGAP2B-201ENST00000463366 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
SRGAP2B-201ENST00000463366 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 FAM74A3Q4VXF1 159 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 TMEM97Q5BJF2 176 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
SRGAP2B-201ENST00000463366 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
SRGAP2B-201ENST00000463366 A0A087WTM6 91 aa10.37□□□□□ -0.75
SRGAP2B-201ENST00000463366 TRAV8-3A0A0A6YYJ7 113 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 FAM231BA6NCW3 169 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 TWIST1Q15672 202 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 OSTCQ9NRP0 149 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
SRGAP2B-201ENST00000463366 PEA15Q15121 130 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 TMEM241Q24JQ0 296 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 Q8N3U1 123 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 FRZBQ92765 325 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 TM2D2Q9BX73 214 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
SRGAP2B-201ENST00000463366 A0A087WX48 190 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 MGPP08493 103 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 ELOBQ15370 118 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 Q9HAA7 133 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 NIT2Q9NQR4 276 aa10.34□□□□□ -0.75
SRGAP2B-201ENST00000463366 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 C9JQL5 133 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 PSCAO43653 123 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 PKIAP61925 76 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 NTM-AS1Q6ZSK4 140 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 TSKUQ8WUA8 353 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 HERC2O95714 4834 aa10.33□□□□□ -0.76
SRGAP2B-201ENST00000463366 SRSF3P84103 164 aaKnown RBP10.32□□□□□ -0.76
SRGAP2B-201ENST00000463366 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
SRGAP2B-201ENST00000463366 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
SRGAP2B-201ENST00000463366 RPL23P62829 140 aaKnown RBP10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 C15orf54Q8N8G6 183 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 PGLYRP4Q96LB8 373 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
SRGAP2B-201ENST00000463366 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
SRGAP2B-201ENST00000463366 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
SRGAP2B-201ENST00000463366 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
SRGAP2B-201ENST00000463366 BORCS7Q96B45 105 aa10.3□□□□□ -0.76
SRGAP2B-201ENST00000463366 V9GYV3 84 aa10.3□□□□□ -0.76
SRGAP2B-201ENST00000463366 A0A1B0GUT8 65 aa10.29□□□□□ -0.76
SRGAP2B-201ENST00000463366 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
SRGAP2B-201ENST00000463366 ATRAIDQ6UW56 229 aa10.29□□□□□ -0.76
SRGAP2B-201ENST00000463366 RMI2Q96E14 147 aa10.29□□□□□ -0.76
SRGAP2B-201ENST00000463366 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
SRGAP2B-201ENST00000463366 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
SRGAP2B-201ENST00000463366 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
SRGAP2B-201ENST00000463366 Q0VG73 95 aa10.28□□□□□ -0.76
SRGAP2B-201ENST00000463366 NTN5Q8WTR8 489 aaPredicted RBP10.28□□□□□ -0.76
SRGAP2B-201ENST00000463366 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
SRGAP2B-201ENST00000463366 Q8N814 137 aa10.27□□□□□ -0.77
SRGAP2B-201ENST00000463366 TMEM191AQ9H0A3 160 aa10.27□□□□□ -0.77
SRGAP2B-201ENST00000463366 RAB14P61106 215 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 ADIRFQ15847 76 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
SRGAP2B-201ENST00000463366 A0A1B0GUV1 79 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 RBX1P62877 108 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 Q8N976 141 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 NAT8BQ9UHF3 227 aa10.25□□□□□ -0.77
SRGAP2B-201ENST00000463366 RYR1P21817 5038 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 RIGQ13278 110 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 COTL1Q14019 142 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
SRGAP2B-201ENST00000463366 IGKV2D-24A0A075B6R9 120 aa10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 GCSHP23434 173 aa10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 GAGE6Q13070 117 aa10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 MIAQ16674 131 aa10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
SRGAP2B-201ENST00000463366 NCR2O95944 276 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms