RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 MSRB1Q9NZV6 116 aa9.36□□□□□ -0.91
SEMA3D-203ENST00000463315 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 F5H697 171 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 RTL8CO15255 209 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 EVI2AP22794 236 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 SSTP61278 116 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 TWIST1Q15672 202 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 FRZBQ92765 325 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 BORCS7Q96B45 105 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 Q9UF83 564 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 V9GYV3 84 aa9.35□□□□□ -0.91
SEMA3D-203ENST00000463315 ADIRFQ15847 76 aa9.34□□□□□ -0.91
SEMA3D-203ENST00000463315 UQCC3Q6UW78 93 aa9.34□□□□□ -0.91
SEMA3D-203ENST00000463315 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
SEMA3D-203ENST00000463315 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 M0QY20 66 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 PNRC1Q12796 327 aaPredicted RBP9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 KRTAP1-5Q9BYS1 174 aa9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
SEMA3D-203ENST00000463315 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
SEMA3D-203ENST00000463315 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
SEMA3D-203ENST00000463315 PGLYRP4Q96LB8 373 aa9.32□□□□□ -0.92
SEMA3D-203ENST00000463315 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
SEMA3D-203ENST00000463315 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 MGPP08493 103 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 TNFRSF18Q9Y5U5 241 aa9.31□□□□□ -0.92
SEMA3D-203ENST00000463315 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
SEMA3D-203ENST00000463315 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
SEMA3D-203ENST00000463315 RIGQ13278 110 aa9.3□□□□□ -0.92
SEMA3D-203ENST00000463315 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
SEMA3D-203ENST00000463315 TMEM191AQ9H0A3 160 aa9.3□□□□□ -0.92
SEMA3D-203ENST00000463315 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 TRBV6-8A0A0A6YYG3 113 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 A0A1B0GW15 77 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 PKIAP61925 76 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 LAGE3Q14657 143 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 NUP35Q8NFH5 326 aa9.29□□□□□ -0.92
SEMA3D-203ENST00000463315 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
SEMA3D-203ENST00000463315 IBA57-AS1B1ANH7 110 aa9.28□□□□□ -0.92
SEMA3D-203ENST00000463315 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 NIT1Q86X76 327 aa9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 URGCP-MRPS24S4R325 110 aa9.27□□□□□ -0.93
SEMA3D-203ENST00000463315 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
SEMA3D-203ENST00000463315 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
SEMA3D-203ENST00000463315 ELOBQ15370 118 aa9.26□□□□□ -0.93
SEMA3D-203ENST00000463315 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 LINC00862A6NCI5 91 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 PPP1R17O96001 155 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 S100A8P05109 93 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 IQCJQ1A5X6 159 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 MRAP2Q96G30 205 aa9.25□□□□□ -0.93
SEMA3D-203ENST00000463315 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 A0A087WX48 190 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 TRBV6-5A0A0K0K1A5 114 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 SEC11CQ9BY50 192 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
SEMA3D-203ENST00000463315 IGHV1-24A0A0C4DH33 117 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 RAB4AP20338 218 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
SEMA3D-203ENST00000463315 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 F8W036 122 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 NCR2O95944 276 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 HBBP68871 147 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 TM2D2Q9BX73 214 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 COX11Q9Y6N1 276 aa9.22□□□□□ -0.93
SEMA3D-203ENST00000463315 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 COTL1Q14019 142 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
SEMA3D-203ENST00000463315 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms