RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 CDK2AP2O75956 126 aa12.04□□□□□ -0.48
LINC00960-201ENST00000463183 SRP19P09132 144 aaKnown RBP12.04□□□□□ -0.48
LINC00960-201ENST00000463183 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
LINC00960-201ENST00000463183 BIN3Q9NQY0 253 aa12.04□□□□□ -0.48
LINC00960-201ENST00000463183 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
LINC00960-201ENST00000463183 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
LINC00960-201ENST00000463183 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
LINC00960-201ENST00000463183 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
LINC00960-201ENST00000463183 RNASE7Q9H1E1 156 aaKnown RBP12.03□□□□□ -0.48
LINC00960-201ENST00000463183 A0A087WX48 190 aa12.02□□□□□ -0.49
LINC00960-201ENST00000463183 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
LINC00960-201ENST00000463183 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.49
LINC00960-201ENST00000463183 NIT1Q86X76 327 aa12.02□□□□□ -0.49
LINC00960-201ENST00000463183 OCC1Q8TAD7 63 aa12.02□□□□□ -0.49
LINC00960-201ENST00000463183 CACNG7P62955 275 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 LAGE3Q14657 143 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
LINC00960-201ENST00000463183 OR10G8Q8NGN5 311 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 TM2D2Q9BX73 214 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
LINC00960-201ENST00000463183 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
LINC00960-201ENST00000463183 K7EN84 100 aa12□□□□□ -0.49
LINC00960-201ENST00000463183 LECT2O14960 151 aa12□□□□□ -0.49
LINC00960-201ENST00000463183 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
LINC00960-201ENST00000463183 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
LINC00960-201ENST00000463183 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
LINC00960-201ENST00000463183 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
LINC00960-201ENST00000463183 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
LINC00960-201ENST00000463183 KRTAP4-5Q9BYR2 181 aa11.99□□□□□ -0.49
LINC00960-201ENST00000463183 RPP21Q9H633 154 aaKnown RBP11.99□□□□□ -0.49
LINC00960-201ENST00000463183 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 F2Z2F3 143 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 KRTAP10-1P60331 282 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 UQCC3Q6UW78 93 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
LINC00960-201ENST00000463183 IGKV2D-24A0A075B6R9 120 aa11.97□□□□□ -0.49
LINC00960-201ENST00000463183 TRGC1P0CF51 173 aa11.97□□□□□ -0.49
LINC00960-201ENST00000463183 NTF3P20783 257 aa11.97□□□□□ -0.49
LINC00960-201ENST00000463183 TWIST1Q15672 202 aa11.97□□□□□ -0.49
LINC00960-201ENST00000463183 Q8N814 137 aa11.97□□□□□ -0.49
LINC00960-201ENST00000463183 GCSHP23434 173 aa11.96□□□□□ -0.49
LINC00960-201ENST00000463183 WFDC2Q14508 124 aa11.96□□□□□ -0.49
LINC00960-201ENST00000463183 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
LINC00960-201ENST00000463183 COMMD7Q86VX2 200 aa11.96□□□□□ -0.49
LINC00960-201ENST00000463183 H7C1H1 209 aa11.95□□□□□ -0.5
LINC00960-201ENST00000463183 GATCO43716 136 aaKnown RBP11.95□□□□□ -0.5
LINC00960-201ENST00000463183 C15orf54Q8N8G6 183 aa11.95□□□□□ -0.5
LINC00960-201ENST00000463183 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
LINC00960-201ENST00000463183 ZNF727A8MUV8 499 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 M0QY20 66 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 CTRLP40313 264 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 GAGE6Q13070 117 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 ELOBQ15370 118 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 MPV17L2Q567V2 206 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 BAALCQ8WXS3 180 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 RMI2Q96E14 147 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
LINC00960-201ENST00000463183 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.93□□□□□ -0.5
LINC00960-201ENST00000463183 CRPP02741 224 aa11.93□□□□□ -0.5
LINC00960-201ENST00000463183 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
LINC00960-201ENST00000463183 HAMPP81172 84 aa11.93□□□□□ -0.5
LINC00960-201ENST00000463183 NTM-AS1Q6ZSK4 140 aa11.93□□□□□ -0.5
LINC00960-201ENST00000463183 Q8N976 141 aa11.93□□□□□ -0.5
LINC00960-201ENST00000463183 CHCHD7Q9BUK0 85 aa11.93□□□□□ -0.5
LINC00960-201ENST00000463183 RASL11AQ6T310 242 aa11.92□□□□□ -0.5
LINC00960-201ENST00000463183 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
LINC00960-201ENST00000463183 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 TMEM97Q5BJF2 176 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 NTN5Q8WTR8 489 aaPredicted RBP11.91□□□□□ -0.5
LINC00960-201ENST00000463183 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
LINC00960-201ENST00000463183 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
LINC00960-201ENST00000463183 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
LINC00960-201ENST00000463183 LINC01551Q86U37 167 aa11.9□□□□□ -0.5
LINC00960-201ENST00000463183 Q8N1X5 172 aa11.9□□□□□ -0.5
LINC00960-201ENST00000463183 FAT1Q14517 4588 aa11.9□□□□□ -0.5
LINC00960-201ENST00000463183 IGHV1-24A0A0C4DH33 117 aa11.89□□□□□ -0.51
LINC00960-201ENST00000463183 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
LINC00960-201ENST00000463183 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
LINC00960-201ENST00000463183 C1orf43Q9BWL3 253 aa11.89□□□□□ -0.51
LINC00960-201ENST00000463183 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
LINC00960-201ENST00000463183 A8MWL6 223 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
LINC00960-201ENST00000463183 XGP55808 180 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 RBX1P62877 108 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 Q0VG73 95 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 FAM231DQ6ZW35 169 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 NIT2Q9NQR4 276 aa11.88□□□□□ -0.51
LINC00960-201ENST00000463183 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
LINC00960-201ENST00000463183 PKIAP61925 76 aa11.87□□□□□ -0.51
LINC00960-201ENST00000463183 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
LINC00960-201ENST00000463183 ENHOQ6UWT2 76 aa11.87□□□□□ -0.51
LINC00960-201ENST00000463183 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
LINC00960-201ENST00000463183 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms