RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 C16orf90A8MZG2 172 aa12.66□□□□□ -0.38
COL9A3-203ENST00000462700 M0QY20 66 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 KRTAP10-2P60368 255 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 LAGE3Q14657 143 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 TWIST1Q15672 202 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 CT83Q5H943 113 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
COL9A3-203ENST00000462700 A8MWL6 223 aa12.64□□□□□ -0.39
COL9A3-203ENST00000462700 C9JQL5 133 aa12.64□□□□□ -0.39
COL9A3-203ENST00000462700 H7C1H1 209 aa12.64□□□□□ -0.39
COL9A3-203ENST00000462700 DAZ4Q86SG3 579 aaKnown RBP12.64□□□□□ -0.39
COL9A3-203ENST00000462700 NIT1Q86X76 327 aa12.64□□□□□ -0.39
COL9A3-203ENST00000462700 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
COL9A3-203ENST00000462700 Q9HAA7 133 aa12.64□□□□□ -0.39
COL9A3-203ENST00000462700 DAZ3Q9NR90 486 aaKnown RBP12.64□□□□□ -0.39
COL9A3-203ENST00000462700 LRP1BQ9NZR2 4599 aa12.63□□□□□ -0.39
COL9A3-203ENST00000462700 A0A087WTM6 91 aa12.63□□□□□ -0.39
COL9A3-203ENST00000462700 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
COL9A3-203ENST00000462700 SRSF3P84103 164 aaKnown RBP12.63□□□□□ -0.39
COL9A3-203ENST00000462700 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
COL9A3-203ENST00000462700 EREGO14944 169 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 PEA15Q15121 130 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 FAM74A3Q4VXF1 159 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 DNAJC30Q96LL9 226 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
COL9A3-203ENST00000462700 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
COL9A3-203ENST00000462700 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
COL9A3-203ENST00000462700 CHCHD7Q9BUK0 85 aa12.61□□□□□ -0.39
COL9A3-203ENST00000462700 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
COL9A3-203ENST00000462700 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
COL9A3-203ENST00000462700 A0A087WX48 190 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 PSCAO43653 123 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 TMEM241Q24JQ0 296 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 RASL11AQ6T310 242 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
COL9A3-203ENST00000462700 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
COL9A3-203ENST00000462700 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
COL9A3-203ENST00000462700 NTM-AS1Q6ZSK4 140 aa12.59□□□□□ -0.39
COL9A3-203ENST00000462700 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
COL9A3-203ENST00000462700 KCNIP4Q6PIL6 250 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 NAT8Q9UHE5 227 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 V9GYV3 84 aa12.58□□□□□ -0.4
COL9A3-203ENST00000462700 LRCOL1A6NCL2 159 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 TMEM262E9PQX1 116 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 PGPEP1Q9NXJ5 209 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 RYR1P21817 5038 aa12.57□□□□□ -0.4
COL9A3-203ENST00000462700 ELOBQ15370 118 aa12.56□□□□□ -0.4
COL9A3-203ENST00000462700 ADIRFQ15847 76 aa12.56□□□□□ -0.4
COL9A3-203ENST00000462700 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
COL9A3-203ENST00000462700 TRBV25-1A0A075B6N4 114 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL9A3-203ENST00000462700 PKIAP61925 76 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 CDPF1Q6NVV7 123 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 FRZBQ92765 325 aa12.55□□□□□ -0.4
COL9A3-203ENST00000462700 IGHV1-24A0A0C4DH33 117 aa12.54□□□□□ -0.4
COL9A3-203ENST00000462700 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
COL9A3-203ENST00000462700 IQCJQ1A5X6 159 aa12.54□□□□□ -0.4
COL9A3-203ENST00000462700 RAB14P61106 215 aa12.53□□□□□ -0.4
COL9A3-203ENST00000462700 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
COL9A3-203ENST00000462700 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.4
COL9A3-203ENST00000462700 CDK2AP2O75956 126 aa12.52□□□□□ -0.41
COL9A3-203ENST00000462700 RMI2Q96E14 147 aa12.52□□□□□ -0.41
COL9A3-203ENST00000462700 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
COL9A3-203ENST00000462700 GAGE6Q13070 117 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 Q8N976 141 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
COL9A3-203ENST00000462700 TMEM191AQ9H0A3 160 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 HSPG2P98160 4391 aa12.51□□□□□ -0.41
COL9A3-203ENST00000462700 IGKV2D-24A0A075B6R9 120 aa12.5□□□□□ -0.41
COL9A3-203ENST00000462700 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
COL9A3-203ENST00000462700 Q0VG73 95 aa12.5□□□□□ -0.41
COL9A3-203ENST00000462700 Q8N814 137 aa12.5□□□□□ -0.41
COL9A3-203ENST00000462700 MAPKAPK5-AS1Q8N8E1 139 aa12.5□□□□□ -0.41
COL9A3-203ENST00000462700 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
COL9A3-203ENST00000462700 CRPP02741 224 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 RBX1P62877 108 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 RIGQ13278 110 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 COTL1Q14019 142 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 WFDC2Q14508 124 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 ENHOQ6UWT2 76 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 DEFB104AQ8WTQ1 72 aa12.49□□□□□ -0.41
COL9A3-203ENST00000462700 TMEM243Q9BU79 118 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms