RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
TRAPPC12-213ENST00000461577 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
TRAPPC12-213ENST00000461577 GTSF1Q8WW33 167 aa7.19□□□□□ -1.26
TRAPPC12-213ENST00000461577 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
TRAPPC12-213ENST00000461577 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
TRAPPC12-213ENST00000461577 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 SUMO4Q6EEV6 95 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 ISOC2Q96AB3 205 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 CNFNQ9BYD5 112 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
TRAPPC12-213ENST00000461577 TSKUQ8WUA8 353 aa7.17□□□□□ -1.26
TRAPPC12-213ENST00000461577 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
TRAPPC12-213ENST00000461577 GFRA4Q9GZZ7 299 aa7.17□□□□□ -1.26
TRAPPC12-213ENST00000461577 URGCP-MRPS24S4R325 110 aa7.17□□□□□ -1.26
TRAPPC12-213ENST00000461577 M0QY20 66 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 TMEM97Q5BJF2 176 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 KCNIP4Q6PIL6 250 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 V9GYV3 84 aa7.16□□□□□ -1.26
TRAPPC12-213ENST00000461577 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.26
TRAPPC12-213ENST00000461577 FAM231BA6NCW3 169 aa7.15□□□□□ -1.26
TRAPPC12-213ENST00000461577 HIGD1CA8MV81 97 aa7.15□□□□□ -1.26
TRAPPC12-213ENST00000461577 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
TRAPPC12-213ENST00000461577 Q6ZRN7 208 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC12-213ENST00000461577 A0A087WX48 190 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 TRBV6-8A0A0A6YYG3 113 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 A0A1B0GUT8 65 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 EREGO14944 169 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 PSCAO43653 123 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 RIGQ13278 110 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 Q9HAA7 133 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 NIT2Q9NQR4 276 aa7.14□□□□□ -1.27
TRAPPC12-213ENST00000461577 PKD1P98161 4303 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 PKIAP61925 76 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 LAGE3Q14657 143 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 NIT1Q86X76 327 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 Q8N3U1 123 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 CHCHD5Q9BSY4 110 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 CHCHD7Q9BUK0 85 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 NAT8BQ9UHF3 227 aa7.13□□□□□ -1.27
TRAPPC12-213ENST00000461577 TRBV25-1A0A075B6N4 114 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 TRAV8-3A0A0A6YYJ7 113 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 IFITM2Q01629 132 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 ELOBQ15370 118 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 SPATA12Q7Z6I5 190 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 FRZBQ92765 325 aa7.12□□□□□ -1.27
TRAPPC12-213ENST00000461577 IGHV1-24A0A0C4DH33 117 aa7.11□□□□□ -1.27
TRAPPC12-213ENST00000461577 NTM-AS1Q6ZSK4 140 aa7.11□□□□□ -1.27
TRAPPC12-213ENST00000461577 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
TRAPPC12-213ENST00000461577 TMEM191AQ9H0A3 160 aa7.11□□□□□ -1.27
TRAPPC12-213ENST00000461577 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
TRAPPC12-213ENST00000461577 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 PPP1R2P9O14990 202 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 PNRC1Q12796 327 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 GAGE6Q13070 117 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 COTL1Q14019 142 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 RMI2Q96E14 147 aa7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 RPL39LQ96EH5 51 aaKnown RBP7.1□□□□□ -1.27
TRAPPC12-213ENST00000461577 A0A087WTM6 91 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 IQCJQ1A5X6 159 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 ATRAIDQ6UW56 229 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 UQCC3Q6UW78 93 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 UBE2WQ96B02 151 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 PKHD1P08F94 4074 aa7.09□□□□□ -1.27
TRAPPC12-213ENST00000461577 A0A1B0GW15 77 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 UBE2L6O14933 153 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 CRPP02741 224 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 ANGP03950 147 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 S100A8P05109 93 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 RAB4AP20338 218 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 PMCHP20382 165 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 AMTP48728 403 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 CAMPP49913 170 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 Q0VG73 95 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 MPV17L2Q567V2 206 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 AMN1Q8IY45 258 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 DEFB104AQ8WTQ1 72 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 MRAP2Q96G30 205 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 RNF185Q96GF1 192 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 COX11Q9Y6N1 276 aa7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
TRAPPC12-213ENST00000461577 IGKV2D-24A0A075B6R9 120 aa7.07□□□□□ -1.28
TRAPPC12-213ENST00000461577 MT-ND4LP03901 98 aa7.07□□□□□ -1.28
TRAPPC12-213ENST00000461577 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
TRAPPC12-213ENST00000461577 MRPL54Q6P161 138 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms