RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 A0A1B0GW15 77 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 SNAPINO95295 136 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 LY6G6CO95867 125 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 RAB4AP20338 218 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 HBBP68871 147 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 ATP5L2Q7Z4Y8 100 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 AMN1Q8IY45 258 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 ZNRF2Q8NHG8 242 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 TRBV7-3A0A075B6L6 115 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 CCL18P55774 89 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 UBE2D3P61077 147 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 UBE2D2P62837 147 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 SH2D6Q7Z4S9 175 aa7.76□□□□□ -1.17
SSBP1-202ENST00000461433 VPS13DQ5THJ4 4388 aa7.75□□□□□ -1.17
SSBP1-202ENST00000461433 FAM104BQ5XKR9 115 aa7.75□□□□□ -1.17
SSBP1-202ENST00000461433 RASL11AQ6T310 242 aa7.75□□□□□ -1.17
SSBP1-202ENST00000461433 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
SSBP1-202ENST00000461433 BTF3L4Q96K17 158 aa7.75□□□□□ -1.17
SSBP1-202ENST00000461433 H7C1H1 209 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 TIRAPP58753 221 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
SSBP1-202ENST00000461433 KCNIP4Q6PIL6 250 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
SSBP1-202ENST00000461433 NIT2Q9NQR4 276 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 MRPS16Q9Y3D3 137 aaKnown RBP7.74□□□□□ -1.17
SSBP1-202ENST00000461433 URGCP-MRPS24S4R325 110 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 HYDINQ4G0P3 5121 aa7.74□□□□□ -1.17
SSBP1-202ENST00000461433 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 S100A8P05109 93 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
SSBP1-202ENST00000461433 UBE2DNLQ8IWF7 75 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 FRZBQ92765 325 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
SSBP1-202ENST00000461433 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 GTSF1LQ9H1H1 148 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 SACSQ9NZJ4 4579 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
SSBP1-202ENST00000461433 MRAP2Q96G30 205 aa7.73□□□□□ -1.17
SSBP1-202ENST00000461433 KMT2AQ03164 3969 aa7.72□□□□□ -1.17
SSBP1-202ENST00000461433 SMKR1H3BMG3 65 aa7.72□□□□□ -1.17
SSBP1-202ENST00000461433 S100PP25815 95 aa7.72□□□□□ -1.17
SSBP1-202ENST00000461433 TNFRSF18Q9Y5U5 241 aa7.72□□□□□ -1.17
SSBP1-202ENST00000461433 IGHV3-38A0A0C4DH36 116 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 NCR2O95944 276 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 ELOBQ15370 118 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 NRACQ8N912 160 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 RYR2Q92736 4967 aa7.71□□□□□ -1.18
SSBP1-202ENST00000461433 LELP1Q5T871 98 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 NTM-AS1Q6ZSK4 140 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 DAZ4Q86SG3 579 aaKnown RBP7.7□□□□□ -1.18
SSBP1-202ENST00000461433 Q9H8V8 135 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 DAZ3Q9NR90 486 aaKnown RBP7.7□□□□□ -1.18
SSBP1-202ENST00000461433 TGIF2-C20orf24A0A0A6YYL0 155 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 OR10J3Q5JRS4 329 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
SSBP1-202ENST00000461433 IGLV2-18A0A075B6J9 118 aa7.69□□□□□ -1.18
SSBP1-202ENST00000461433 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
SSBP1-202ENST00000461433 TRBV24-1A0A075B6N3 115 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 TRBV6-8A0A0A6YYG3 113 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 D6R8Y8 96 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 SIVA1O15304 175 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 CKS2P33552 79 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 POLR2KP53803 58 aaKnown RBP7.68□□□□□ -1.18
SSBP1-202ENST00000461433 CBLN2Q8IUK8 224 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 DEFB104AQ8WTQ1 72 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 TMEM70Q9BUB7 260 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 GNB1LQ9BYB4 327 aa7.68□□□□□ -1.18
SSBP1-202ENST00000461433 PPBPP02775 128 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 Q6ZR54 194 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 ST20Q9HBF5 79 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 RYR3Q15413 4870 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 TRAV8-6A0A0B4J262 113 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 PPP1R17O96001 155 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 NPYP01303 97 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 DNAH10OSP0CZ25 163 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
SSBP1-202ENST00000461433 TRBV27A0A0K0K1C4 114 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 M0R2N4 97 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 HLA-DQA1P01909 254 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
SSBP1-202ENST00000461433 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 TMEM97Q5BJF2 176 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 Q8N3U1 123 aa7.66□□□□□ -1.18
SSBP1-202ENST00000461433 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.66□□□□□ -1.18
SSBP1-202ENST00000461433 I3L3M4 83 aa7.65□□□□□ -1.18
SSBP1-202ENST00000461433 PHOX2AO14813 284 aa7.65□□□□□ -1.18
SSBP1-202ENST00000461433 KIAA1644Q3SXP7 199 aa7.65□□□□□ -1.18
SSBP1-202ENST00000461433 COX19Q49B96 90 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms