RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FAT2Q9NYQ8 4349 aa9.04□□□□□ -0.96
RAB11FIP3-207ENST00000461009 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 A0A1B0GUT8 65 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 LINC00315P59091 139 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 UQCC3Q6UW78 93 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 Q9UF83 564 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
RAB11FIP3-207ENST00000461009 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 UBE2D3P61077 147 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 UBE2D2P62837 147 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 RIGQ13278 110 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 NFE4Q86UQ8 179 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.97
RAB11FIP3-207ENST00000461009 PPP1R2P9O14990 202 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 DNAH10OSP0CZ25 163 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 TMEM97Q5BJF2 176 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 SPATA12Q7Z6I5 190 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 WFDC10BQ8IUB3 73 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 C10orf126Q8N4M7 172 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 NAT8BQ9UHF3 227 aa9.01□□□□□ -0.97
RAB11FIP3-207ENST00000461009 M0QY20 66 aa9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 SUMO4Q6EEV6 95 aa9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 RASL11AQ6T310 242 aa9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 DAZ4Q86SG3 579 aaKnown RBP9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 DAZ3Q9NR90 486 aaKnown RBP9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 HERC2O95714 4834 aa9□□□□□ -0.97
RAB11FIP3-207ENST00000461009 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 CDK2AP2O75956 126 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 LINC01556Q5JQF7 62 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 NUP35Q8NFH5 326 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 FRZBQ92765 325 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 KRTAP17-1Q9BYP8 105 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 NIT2Q9NQR4 276 aa8.99□□□□□ -0.97
RAB11FIP3-207ENST00000461009 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 MT-ND4LP03901 98 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 KCNIP4Q6PIL6 250 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 ANAPC16Q96DE5 110 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 URGCP-MRPS24S4R325 110 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 PKD1P98161 4303 aa8.98□□□□□ -0.97
RAB11FIP3-207ENST00000461009 A0A1B0GW15 77 aa8.97□□□□□ -0.97
RAB11FIP3-207ENST00000461009 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
RAB11FIP3-207ENST00000461009 COMMD7Q86VX2 200 aa8.97□□□□□ -0.97
RAB11FIP3-207ENST00000461009 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
RAB11FIP3-207ENST00000461009 KIAA1109Q2LD37 5005 aa8.97□□□□□ -0.97
RAB11FIP3-207ENST00000461009 LINC00862A6NCI5 91 aa8.96□□□□□ -0.98
RAB11FIP3-207ENST00000461009 F8W036 122 aa8.96□□□□□ -0.98
RAB11FIP3-207ENST00000461009 S100A8P05109 93 aa8.96□□□□□ -0.98
RAB11FIP3-207ENST00000461009 PKIAP61925 76 aa8.96□□□□□ -0.98
RAB11FIP3-207ENST00000461009 GATD1Q8NB37 220 aa8.96□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TRBV6-8A0A0A6YYG3 113 aa8.95□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IGHV3-30P01768 117 aa8.95□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IGHV3-33P01772 117 aa8.95□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IGHV3-30-5P0DP03 117 aa8.95□□□□□ -0.98
RAB11FIP3-207ENST00000461009 A0A087WX48 190 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IBA57-AS1B1ANH7 110 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TMEM262E9PQX1 116 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 ELOBQ15370 118 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 NIT1Q86X76 327 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 MAPKAPK5-AS1Q8N8E1 139 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 CHCHD7Q9BUK0 85 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 SEC11CQ9BY50 192 aa8.94□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TRBV25-1A0A075B6N4 114 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TRAV26-2A0A0B4J265 109 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 PPP1R17O96001 155 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 RAB4AP20338 218 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 CAMPP49913 170 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 CHCHD5Q9BSY4 110 aa8.93□□□□□ -0.98
RAB11FIP3-207ENST00000461009 DNAH11Q96DT5 4516 aa8.92□□□□□ -0.98
RAB11FIP3-207ENST00000461009 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
RAB11FIP3-207ENST00000461009 HBBP68871 147 aa8.92□□□□□ -0.98
RAB11FIP3-207ENST00000461009 COTL1Q14019 142 aa8.92□□□□□ -0.98
RAB11FIP3-207ENST00000461009 LAGE3Q14657 143 aa8.92□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 PSCAO43653 123 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 IQCJQ1A5X6 159 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 MRPL54Q6P161 138 aaKnown RBP8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 NTM-AS1Q6ZSK4 140 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 ATP5L2Q7Z4Y8 100 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 RNF185Q96GF1 192 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 ST20Q9HBF5 79 aa8.91□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TRBV6-5A0A0K0K1A5 114 aa8.9□□□□□ -0.98
RAB11FIP3-207ENST00000461009 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
RAB11FIP3-207ENST00000461009 TMEM243Q9BU79 118 aa8.9□□□□□ -0.98
RAB11FIP3-207ENST00000461009 CTDSP1Q9GZU7 261 aa8.9□□□□□ -0.98
RAB11FIP3-207ENST00000461009 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.99
RAB11FIP3-207ENST00000461009 A0A087WTM6 91 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms