RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 BTF3P20290 206 aaKnown RBP14.84□□□□□ -0.03
SSNA1-202ENST00000459860 KRTAP1-5Q9BYS1 174 aa14.84□□□□□ -0.03
SSNA1-202ENST00000459860 Q9UF83 564 aa14.84□□□□□ -0.03
SSNA1-202ENST00000459860 PKD1P98161 4303 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 IGHV3-38A0A0C4DH36 116 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 DNAH10OSP0CZ25 163 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 OR10G8Q8NGN5 311 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 TSKUQ8WUA8 353 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 PGLYRP4Q96LB8 373 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 GFRA4Q9GZZ7 299 aa14.83□□□□□ -0.04
SSNA1-202ENST00000459860 C10orf126Q8N4M7 172 aa14.82□□□□□ -0.04
SSNA1-202ENST00000459860 FAM231BA6NCW3 169 aa14.81□□□□□ -0.04
SSNA1-202ENST00000459860 LINC00315P59091 139 aa14.81□□□□□ -0.04
SSNA1-202ENST00000459860 UBE2D3P61077 147 aa14.81□□□□□ -0.04
SSNA1-202ENST00000459860 UBE2D2P62837 147 aa14.81□□□□□ -0.04
SSNA1-202ENST00000459860 NEXN-AS1Q8NBZ9 246 aa14.81□□□□□ -0.04
SSNA1-202ENST00000459860 FOXA3P55318 350 aaPredicted RBP14.8□□□□□ -0.04
SSNA1-202ENST00000459860 V9GYV3 84 aa14.8□□□□□ -0.04
SSNA1-202ENST00000459860 HIGD1CA8MV81 97 aa14.79□□□□□ -0.04
SSNA1-202ENST00000459860 IFITM2Q01629 132 aa14.79□□□□□ -0.04
SSNA1-202ENST00000459860 LINC01556Q5JQF7 62 aa14.79□□□□□ -0.04
SSNA1-202ENST00000459860 SUMO4Q6EEV6 95 aa14.79□□□□□ -0.04
SSNA1-202ENST00000459860 TNFRSF18Q9Y5U5 241 aa14.79□□□□□ -0.04
SSNA1-202ENST00000459860 DNAJC30Q96LL9 226 aa14.78□□□□□ -0.04
SSNA1-202ENST00000459860 ABCA13Q86UQ4 5058 aa14.78□□□□□ -0.04
SSNA1-202ENST00000459860 A0A1B0GUT8 65 aa14.77□□□□□ -0.05
SSNA1-202ENST00000459860 NFE4Q86UQ8 179 aa14.77□□□□□ -0.05
SSNA1-202ENST00000459860 M0QY20 66 aa14.76□□□□□ -0.05
SSNA1-202ENST00000459860 TMEM97Q5BJF2 176 aa14.76□□□□□ -0.05
SSNA1-202ENST00000459860 RASL11AQ6T310 242 aa14.76□□□□□ -0.05
SSNA1-202ENST00000459860 DAZ4Q86SG3 579 aaKnown RBP14.76□□□□□ -0.05
SSNA1-202ENST00000459860 DAZ3Q9NR90 486 aaKnown RBP14.76□□□□□ -0.05
SSNA1-202ENST00000459860 URGCP-MRPS24S4R325 110 aa14.76□□□□□ -0.05
SSNA1-202ENST00000459860 IGHV3-30P01768 117 aa14.75□□□□□ -0.05
SSNA1-202ENST00000459860 IGHV3-33P01772 117 aa14.75□□□□□ -0.05
SSNA1-202ENST00000459860 IGHV3-30-3P0DP02 117 aa14.75□□□□□ -0.05
SSNA1-202ENST00000459860 IGHV3-30-5P0DP03 117 aa14.75□□□□□ -0.05
SSNA1-202ENST00000459860 NAT8BQ9UHF3 227 aa14.75□□□□□ -0.05
SSNA1-202ENST00000459860 RIGQ13278 110 aa14.74□□□□□ -0.05
SSNA1-202ENST00000459860 KCNIP4Q6PIL6 250 aa14.74□□□□□ -0.05
SSNA1-202ENST00000459860 PNRC1Q12796 327 aaPredicted RBP14.73□□□□□ -0.05
SSNA1-202ENST00000459860 NIT2Q9NQR4 276 aa14.73□□□□□ -0.05
SSNA1-202ENST00000459860 UQCC3Q6UW78 93 aa14.72□□□□□ -0.05
SSNA1-202ENST00000459860 NUP35Q8NFH5 326 aa14.72□□□□□ -0.05
SSNA1-202ENST00000459860 FRZBQ92765 325 aa14.72□□□□□ -0.05
SSNA1-202ENST00000459860 TRBV6-8A0A0A6YYG3 113 aa14.71□□□□□ -0.05
SSNA1-202ENST00000459860 PPP1R2P9O14990 202 aa14.71□□□□□ -0.05
SSNA1-202ENST00000459860 TNP2Q05952 138 aa14.71□□□□□ -0.05
SSNA1-202ENST00000459860 A0A087WX48 190 aa14.7□□□□□ -0.06
SSNA1-202ENST00000459860 SMIM27A0A1W2PRY6 76 aa14.7□□□□□ -0.06
SSNA1-202ENST00000459860 IBA57-AS1B1ANH7 110 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 PKIAP61925 76 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 LAGE3Q14657 143 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 NIT1Q86X76 327 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 GATD1Q8NB37 220 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 CHCHD7Q9BUK0 85 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 TMEM191AQ9H0A3 160 aa14.69□□□□□ -0.06
SSNA1-202ENST00000459860 TRBV25-1A0A075B6N4 114 aa14.68□□□□□ -0.06
SSNA1-202ENST00000459860 TRAV26-2A0A0B4J265 109 aa14.68□□□□□ -0.06
SSNA1-202ENST00000459860 CHCHD5Q9BSY4 110 aa14.68□□□□□ -0.06
SSNA1-202ENST00000459860 TMEM262E9PQX1 116 aa14.67□□□□□ -0.06
SSNA1-202ENST00000459860 Q9HAA7 133 aa14.67□□□□□ -0.06
SSNA1-202ENST00000459860 A0A1B0GW15 77 aa14.66□□□□□ -0.06
SSNA1-202ENST00000459860 MT-ND4LP03901 98 aa14.66□□□□□ -0.06
SSNA1-202ENST00000459860 ELOBQ15370 118 aa14.66□□□□□ -0.06
SSNA1-202ENST00000459860 Q6ZRN7 208 aaPredicted RBP14.66□□□□□ -0.06
SSNA1-202ENST00000459860 HSPG2P98160 4391 aa14.66□□□□□ -0.06
SSNA1-202ENST00000459860 IGHV1-24A0A0C4DH33 117 aa14.65□□□□□ -0.06
SSNA1-202ENST00000459860 PSCAO43653 123 aa14.65□□□□□ -0.06
SSNA1-202ENST00000459860 COMMD7Q86VX2 200 aa14.65□□□□□ -0.06
SSNA1-202ENST00000459860 Q8N3U1 123 aa14.65□□□□□ -0.06
SSNA1-202ENST00000459860 ANAPC16Q96DE5 110 aa14.65□□□□□ -0.06
SSNA1-202ENST00000459860 F8W036 122 aa14.64□□□□□ -0.07
SSNA1-202ENST00000459860 EREGO14944 169 aa14.64□□□□□ -0.07
SSNA1-202ENST00000459860 S100A8P05109 93 aa14.64□□□□□ -0.07
SSNA1-202ENST00000459860 TRAV8-3A0A0A6YYJ7 113 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 TMEM218A2RU14 115 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 CAMPP49913 170 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 COTL1Q14019 142 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 IQCJQ1A5X6 159 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 AMN1Q8IY45 258 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 RPL39LQ96EH5 51 aaKnown RBP14.63□□□□□ -0.07
SSNA1-202ENST00000459860 MRAP2Q96G30 205 aa14.63□□□□□ -0.07
SSNA1-202ENST00000459860 KRTAP4-5Q9BYR2 181 aa14.62□□□□□ -0.07
SSNA1-202ENST00000459860 RAB4AP20338 218 aa14.61□□□□□ -0.07
SSNA1-202ENST00000459860 HBBP68871 147 aa14.61□□□□□ -0.07
SSNA1-202ENST00000459860 MRPL54Q6P161 138 aaKnown RBP14.61□□□□□ -0.07
SSNA1-202ENST00000459860 TM2D2Q9BX73 214 aa14.61□□□□□ -0.07
SSNA1-202ENST00000459860 KLK12Q9UKR0 248 aa14.61□□□□□ -0.07
SSNA1-202ENST00000459860 LRP1BQ9NZR2 4599 aa14.61□□□□□ -0.07
SSNA1-202ENST00000459860 AMTP48728 403 aa14.6□□□□□ -0.07
SSNA1-202ENST00000459860 RMI2Q96E14 147 aa14.6□□□□□ -0.07
SSNA1-202ENST00000459860 RNF185Q96GF1 192 aa14.6□□□□□ -0.07
SSNA1-202ENST00000459860 TMEM243Q9BU79 118 aa14.6□□□□□ -0.07
SSNA1-202ENST00000459860 SDHAF1A6NFY7 115 aa14.59□□□□□ -0.07
SSNA1-202ENST00000459860 GAGE6Q13070 117 aa14.59□□□□□ -0.07
SSNA1-202ENST00000459860 MPV17L2Q567V2 206 aa14.59□□□□□ -0.07
SSNA1-202ENST00000459860 ST20Q9HBF5 79 aa14.59□□□□□ -0.07
SSNA1-202ENST00000459860 TRBV6-5A0A0K0K1A5 114 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms