RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
HDAC9-217ENST00000455069 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
HDAC9-217ENST00000455069 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
HDAC9-217ENST00000455069 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
HDAC9-217ENST00000455069 K7EP13 123 aa7.6□□□□□ -1.19
HDAC9-217ENST00000455069 M0QY20 66 aa7.6□□□□□ -1.19
HDAC9-217ENST00000455069 GATCO43716 136 aaKnown RBP7.6□□□□□ -1.19
HDAC9-217ENST00000455069 MGPP08493 103 aa7.6□□□□□ -1.19
HDAC9-217ENST00000455069 SUMO4Q6EEV6 95 aa7.6□□□□□ -1.19
HDAC9-217ENST00000455069 IBA57-AS1B1ANH7 110 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 F5H697 171 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 SMIM17P0DL12 118 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 KRTAP10-2P60368 255 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 ERVFC1-1P60608 527 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 CT83Q5H943 113 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 C10orf126Q8N4M7 172 aa7.59□□□□□ -1.19
HDAC9-217ENST00000455069 HSPG2P98160 4391 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 A0A087WWC5 75 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 RPL23P62829 140 aaKnown RBP7.58□□□□□ -1.2
HDAC9-217ENST00000455069 TWIST1Q15672 202 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 DAZ4Q86SG3 579 aaKnown RBP7.58□□□□□ -1.2
HDAC9-217ENST00000455069 NIT1Q86X76 327 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 ISOC2Q96AB3 205 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 DPH3P1Q9H4G8 78 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 DAZ3Q9NR90 486 aaKnown RBP7.58□□□□□ -1.2
HDAC9-217ENST00000455069 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
HDAC9-217ENST00000455069 LRP1BQ9NZR2 4599 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 A8MWL6 223 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 FOXA3P55318 350 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-217ENST00000455069 PEA15Q15121 130 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 SPATA12Q7Z6I5 190 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 NFE4Q86UQ8 179 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 V9GYV3 84 aa7.57□□□□□ -1.2
HDAC9-217ENST00000455069 TRBV6-8A0A0A6YYG3 113 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 DNAJC30Q96LL9 226 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 Q9HAA7 133 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 NAT8Q9UHE5 227 aa7.56□□□□□ -1.2
HDAC9-217ENST00000455069 DNAH5Q8TE73 4624 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 A0A087WTM6 91 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC9-217ENST00000455069 IFITM2Q01629 132 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 LAGE3Q14657 143 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 ADIRFQ15847 76 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 RASL11AQ6T310 242 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
HDAC9-217ENST00000455069 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
HDAC9-217ENST00000455069 C16orf90A8MZG2 172 aa7.54□□□□□ -1.2
HDAC9-217ENST00000455069 H7C1H1 209 aa7.54□□□□□ -1.2
HDAC9-217ENST00000455069 MPV17L2Q567V2 206 aa7.54□□□□□ -1.2
HDAC9-217ENST00000455069 FAM231BA6NCW3 169 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 NUP35Q8NFH5 326 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 KLK12Q9UKR0 248 aa7.53□□□□□ -1.2
HDAC9-217ENST00000455069 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 A6NJY4 79 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 WFDC2Q14508 124 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 IQCJQ1A5X6 159 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 MAPKAPK5-AS1Q8N8E1 139 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 DEFB104AQ8WTQ1 72 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
HDAC9-217ENST00000455069 CHCHD7Q9BUK0 85 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 URGCP-MRPS24S4R325 110 aa7.52□□□□□ -1.21
HDAC9-217ENST00000455069 A0A087WX48 190 aa7.51□□□□□ -1.21
HDAC9-217ENST00000455069 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
HDAC9-217ENST00000455069 Q8N976 141 aa7.51□□□□□ -1.21
HDAC9-217ENST00000455069 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
HDAC9-217ENST00000455069 CHCHD5Q9BSY4 110 aa7.51□□□□□ -1.21
HDAC9-217ENST00000455069 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
HDAC9-217ENST00000455069 TRBV25-1A0A075B6N4 114 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 TRAV8-3A0A0A6YYJ7 113 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 PSCAO43653 123 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 RAB14P61106 215 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 GAGE6Q13070 117 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 ATRAIDQ6UW56 229 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 SMIM15Q7Z3B0 74 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-217ENST00000455069 BORCS7Q96B45 105 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 TMEM191AQ9H0A3 160 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
HDAC9-217ENST00000455069 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
HDAC9-217ENST00000455069 TMEM262E9PQX1 116 aa7.49□□□□□ -1.21
HDAC9-217ENST00000455069 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
HDAC9-217ENST00000455069 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
HDAC9-217ENST00000455069 RBX1P62877 108 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms