RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TEX261Q6UWH6 196 aa16.64■□□□□ 0.25
MSH2-203ENST00000454849 NIT1Q86X76 327 aa16.64■□□□□ 0.25
MSH2-203ENST00000454849 GTSF1Q8WW33 167 aa16.64■□□□□ 0.25
MSH2-203ENST00000454849 DNAJC30Q96LL9 226 aa16.64■□□□□ 0.25
MSH2-203ENST00000454849 ZNF727A8MUV8 499 aa16.63■□□□□ 0.25
MSH2-203ENST00000454849 CTRLP40313 264 aa16.63■□□□□ 0.25
MSH2-203ENST00000454849 URGCP-MRPS24S4R325 110 aa16.63■□□□□ 0.25
MSH2-203ENST00000454849 M0QY20 66 aa16.62■□□□□ 0.25
MSH2-203ENST00000454849 C9JQL5 133 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 TMEM262E9PQX1 116 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 TRGC1P0CF51 173 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 SRSF3P84103 164 aaKnown RBP16.61■□□□□ 0.25
MSH2-203ENST00000454849 DEFB104AQ8WTQ1 72 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 PGLYRP4Q96LB8 373 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 KLK12Q9UKR0 248 aa16.61■□□□□ 0.25
MSH2-203ENST00000454849 TRBV6-8A0A0A6YYG3 113 aa16.6■□□□□ 0.25
MSH2-203ENST00000454849 FOXA3P55318 350 aaPredicted RBP16.6■□□□□ 0.25
MSH2-203ENST00000454849 LINC01551Q86U37 167 aa16.6■□□□□ 0.25
MSH2-203ENST00000454849 A0A087WX48 190 aa16.59■□□□□ 0.25
MSH2-203ENST00000454849 NTM-AS1Q6ZSK4 140 aa16.59■□□□□ 0.25
MSH2-203ENST00000454849 DPH3P1Q9H4G8 78 aa16.59■□□□□ 0.25
MSH2-203ENST00000454849 LRCOL1A6NCL2 159 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 LAGE3Q14657 143 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 WDR73Q6P4I2 378 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 FAM231DQ6ZW35 169 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 CHCHD5Q9BSY4 110 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 PGPEP1Q9NXJ5 209 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 LRP1BQ9NZR2 4599 aa16.58■□□□□ 0.24
MSH2-203ENST00000454849 TRAV26-2A0A0B4J265 109 aa16.56■□□□□ 0.24
MSH2-203ENST00000454849 A8MWL6 223 aa16.56■□□□□ 0.24
MSH2-203ENST00000454849 LECT2O14960 151 aa16.56■□□□□ 0.24
MSH2-203ENST00000454849 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.56■□□□□ 0.24
MSH2-203ENST00000454849 CNFNQ9BYD5 112 aa16.56■□□□□ 0.24
MSH2-203ENST00000454849 KRTAP17-1Q9BYP8 105 aa16.56■□□□□ 0.24
MSH2-203ENST00000454849 TRAV8-3A0A0A6YYJ7 113 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 H7C1H1 209 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 WFDC2Q14508 124 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 KCNIP4Q6PIL6 250 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 RASL11AQ6T310 242 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 UBE2WQ96B02 151 aa16.55■□□□□ 0.24
MSH2-203ENST00000454849 RYR1P21817 5038 aa16.54■□□□□ 0.24
MSH2-203ENST00000454849 MPV17L2Q567V2 206 aa16.54■□□□□ 0.24
MSH2-203ENST00000454849 TM2D2Q9BX73 214 aa16.54■□□□□ 0.24
MSH2-203ENST00000454849 NDUFS6O75380 124 aaKnown RBP16.53■□□□□ 0.24
MSH2-203ENST00000454849 GAGE6Q13070 117 aa16.53■□□□□ 0.24
MSH2-203ENST00000454849 TMEM241Q24JQ0 296 aa16.53■□□□□ 0.24
MSH2-203ENST00000454849 MAPKAPK5-AS1Q8N8E1 139 aa16.53■□□□□ 0.24
MSH2-203ENST00000454849 C15orf54Q8N8G6 183 aa16.53■□□□□ 0.24
MSH2-203ENST00000454849 Q8N976 141 aa16.53■□□□□ 0.24
MSH2-203ENST00000454849 GATD1Q8NB37 220 aa16.52■□□□□ 0.24
MSH2-203ENST00000454849 DNAH5Q8TE73 4624 aa16.52■□□□□ 0.23
MSH2-203ENST00000454849 IGKV2D-24A0A075B6R9 120 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 CDK2AP2O75956 126 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 KRTAP10-1P60331 282 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 PEA15Q15121 130 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 BAALCQ8WXS3 180 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 NIT2Q9NQR4 276 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 OSTCQ9NRP0 149 aa16.51■□□□□ 0.23
MSH2-203ENST00000454849 RPL23P62829 140 aaKnown RBP16.5■□□□□ 0.23
MSH2-203ENST00000454849 CT83Q5H943 113 aa16.5■□□□□ 0.23
MSH2-203ENST00000454849 ATRAIDQ6UW56 229 aa16.5■□□□□ 0.23
MSH2-203ENST00000454849 TSKUQ8WUA8 353 aa16.5■□□□□ 0.23
MSH2-203ENST00000454849 RPL39LQ96EH5 51 aaKnown RBP16.5■□□□□ 0.23
MSH2-203ENST00000454849 HIGD1CA8MV81 97 aa16.49■□□□□ 0.23
MSH2-203ENST00000454849 ANGP03950 147 aaKnown RBP16.49■□□□□ 0.23
MSH2-203ENST00000454849 ADIRFQ15847 76 aa16.49■□□□□ 0.23
MSH2-203ENST00000454849 SMIM15Q7Z3B0 74 aa16.49■□□□□ 0.23
MSH2-203ENST00000454849 Q8N814 137 aa16.49■□□□□ 0.23
MSH2-203ENST00000454849 CHCHD7Q9BUK0 85 aa16.49■□□□□ 0.23
MSH2-203ENST00000454849 TRBV25-1A0A075B6N4 114 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 ELOBQ15370 118 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 TMEM97Q5BJF2 176 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 CDPF1Q6NVV7 123 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 ENHOQ6UWT2 76 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 ISOC2Q96AB3 205 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 KRTAP4-5Q9BYR2 181 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 V9GYV3 84 aa16.48■□□□□ 0.23
MSH2-203ENST00000454849 IGHV1-24A0A0C4DH33 117 aa16.47■□□□□ 0.23
MSH2-203ENST00000454849 FAM74A3Q4VXF1 159 aa16.47■□□□□ 0.23
MSH2-203ENST00000454849 CLPSL2Q6UWE3 100 aa16.47■□□□□ 0.23
MSH2-203ENST00000454849 BORCS7Q96B45 105 aa16.47■□□□□ 0.23
MSH2-203ENST00000454849 IGLV5-52A0A0A0MRZ9 124 aa16.46■□□□□ 0.23
MSH2-203ENST00000454849 RBX1P62877 108 aa16.46■□□□□ 0.23
MSH2-203ENST00000454849 HSPG2P98160 4391 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 GAS8-AS1O95177 125 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 GCSHP23434 173 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 IQCJQ1A5X6 159 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 RMI2Q96E14 147 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 NAT8Q9UHE5 227 aa16.45■□□□□ 0.22
MSH2-203ENST00000454849 A0A1B0GUT8 65 aa16.44■□□□□ 0.22
MSH2-203ENST00000454849 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.43■□□□□ 0.22
MSH2-203ENST00000454849 TMEM243Q9BU79 118 aa16.43■□□□□ 0.22
MSH2-203ENST00000454849 GFRA4Q9GZZ7 299 aa16.43■□□□□ 0.22
MSH2-203ENST00000454849 APOBP04114 4563 aaKnown RBP16.42■□□□□ 0.22
MSH2-203ENST00000454849 CRPP02741 224 aa16.42■□□□□ 0.22
MSH2-203ENST00000454849 LINC00269Q8N2A0 174 aa16.42■□□□□ 0.22
MSH2-203ENST00000454849 NUP35Q8NFH5 326 aa16.42■□□□□ 0.22
MSH2-203ENST00000454849 HAMPP81172 84 aa16.41■□□□□ 0.22
MSH2-203ENST00000454849 Q0VG73 95 aa16.41■□□□□ 0.22
MSH2-203ENST00000454849 COTL1Q14019 142 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms