RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 GAGE4Q13068 117 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 GAGE5Q13069 117 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 NEXN-AS1Q8NBZ9 246 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 LINC00476Q8WZB0 136 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
LINC00339-205ENST00000452322 Q9UF83 564 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 RAB4AP20338 218 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 CCL18P55774 89 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 RNF185Q96GF1 192 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 TRAV26-2A0A0B4J265 109 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 UBE2D3P61077 147 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 UBE2D2P62837 147 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 ESRGQ1W209 222 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 LYPD5Q6UWN5 251 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 MRAP2Q96G30 205 aa8.22□□□□□ -1.09
LINC00339-205ENST00000452322 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 LCE6AA0A183 80 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 TIRAPP58753 221 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 ATRAIDQ6UW56 229 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 LINC00588Q9Y4M8 146 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
LINC00339-205ENST00000452322 RYR2Q92736 4967 aa8.2□□□□□ -1.1
LINC00339-205ENST00000452322 LY6G6CO95867 125 aa8.2□□□□□ -1.1
LINC00339-205ENST00000452322 KMT2AQ03164 3969 aa8.2□□□□□ -1.1
LINC00339-205ENST00000452322 MRPL51Q4U2R6 128 aaKnown RBP8.2□□□□□ -1.1
LINC00339-205ENST00000452322 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
LINC00339-205ENST00000452322 MRPS16Q9Y3D3 137 aaKnown RBP8.2□□□□□ -1.1
LINC00339-205ENST00000452322 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
LINC00339-205ENST00000452322 ELOBQ15370 118 aa8.19□□□□□ -1.1
LINC00339-205ENST00000452322 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
LINC00339-205ENST00000452322 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.19□□□□□ -1.1
LINC00339-205ENST00000452322 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
LINC00339-205ENST00000452322 TRBV6-5A0A0K0K1A5 114 aa8.18□□□□□ -1.1
LINC00339-205ENST00000452322 PPP1R17O96001 155 aa8.18□□□□□ -1.1
LINC00339-205ENST00000452322 COX19Q49B96 90 aa8.18□□□□□ -1.1
LINC00339-205ENST00000452322 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
LINC00339-205ENST00000452322 TMEM136Q6ZRR5 245 aa8.18□□□□□ -1.1
LINC00339-205ENST00000452322 RPL39LQ96EH5 51 aaKnown RBP8.18□□□□□ -1.1
LINC00339-205ENST00000452322 TRBV24-1A0A075B6N3 115 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 GAS8-AS1O95177 125 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 NCR2O95944 276 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 PPBPP02775 128 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 CKS2P33552 79 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
LINC00339-205ENST00000452322 LELP1Q5T871 98 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 GNB1LQ9BYB4 327 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 SMCO4Q9NRQ5 59 aa8.17□□□□□ -1.1
LINC00339-205ENST00000452322 TGIF2-C20orf24A0A0A6YYL0 155 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 IGHV3-38A0A0C4DH36 116 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 D6R8Y8 96 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 HLA-DQA1P01909 254 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 NRACQ8N912 160 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 RYR3Q15413 4870 aa8.16□□□□□ -1.1
LINC00339-205ENST00000452322 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
LINC00339-205ENST00000452322 MT-ND6P03923 174 aa8.15□□□□□ -1.1
LINC00339-205ENST00000452322 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
LINC00339-205ENST00000452322 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
LINC00339-205ENST00000452322 ST20Q9HBF5 79 aa8.15□□□□□ -1.1
LINC00339-205ENST00000452322 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
LINC00339-205ENST00000452322 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
LINC00339-205ENST00000452322 PHOX2AO14813 284 aa8.14□□□□□ -1.11
LINC00339-205ENST00000452322 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
LINC00339-205ENST00000452322 Q9H8V8 135 aa8.14□□□□□ -1.11
LINC00339-205ENST00000452322 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 SIVA1O15304 175 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 APCSP02743 223 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
LINC00339-205ENST00000452322 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
LINC00339-205ENST00000452322 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 PRELID3AQ96N28 172 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
LINC00339-205ENST00000452322 I3L3M4 83 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 ATP6V1G1O75348 118 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 NPYP01303 97 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 S100A1P23297 94 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 COTL1Q14019 142 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
LINC00339-205ENST00000452322 TRBV25-1A0A075B6N4 114 aa8.11□□□□□ -1.11
LINC00339-205ENST00000452322 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
LINC00339-205ENST00000452322 VCYO14598 125 aa8.11□□□□□ -1.11
LINC00339-205ENST00000452322 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
LINC00339-205ENST00000452322 PMCHP20382 165 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms