RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 A0A0B4J2C4 111 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 C14orf178Q8N769 122 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 MGPP08493 103 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
SYNGAP1-204ENST00000449372 TRIAP1O43715 76 aa10.15□□□□□ -0.78
SYNGAP1-204ENST00000449372 COX7CP15954 63 aa10.15□□□□□ -0.78
SYNGAP1-204ENST00000449372 H3BT86 120 aa10.15□□□□□ -0.78
SYNGAP1-204ENST00000449372 Q8N6K4 173 aa10.15□□□□□ -0.78
SYNGAP1-204ENST00000449372 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.78
SYNGAP1-204ENST00000449372 IGSF10Q6WRI0 2623 aa10.15□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGHV7-81A0A0B4J1V7 117 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 C4orf26Q17RF5 130 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 TMEM141Q96I45 108 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 SMAD5-AS1Q9Y6J3 95 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 TRBV30A0A0K0K1B3 111 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 ZNRF2Q8NHG8 242 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 ATP5G1P05496 136 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 J3QLI3 93 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 UBE2E1P51965 193 aa10.14□□□□□ -0.79
SYNGAP1-204ENST00000449372 LMO4P61968 165 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGKV3D-20A0A0C4DH25 116 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 TRACP01848 142 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 CRYGAP11844 174 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 DEFB121Q5J5C9 76 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 TRAV41A0A0B4J266 112 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 J3QQQ9 107 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 CRYGDP07320 174 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 SEC61GP60059 68 aa10.13□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGHV3-35A0A0C4DH35 117 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 PKIGQ9Y2B9 76 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 COL12A1Q99715 3063 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 Q8N9W7 124 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 DPH3Q96FX2 82 aa10.12□□□□□ -0.79
SYNGAP1-204ENST00000449372 VCYO14598 125 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 NDPQ00604 133 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 ACYP1P07311 99 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 COX6CP09669 75 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 AMELXQ99217 191 aa10.11□□□□□ -0.79
SYNGAP1-204ENST00000449372 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
SYNGAP1-204ENST00000449372 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
SYNGAP1-204ENST00000449372 CELSR1Q9NYQ6 3014 aa10.1□□□□□ -0.79
SYNGAP1-204ENST00000449372 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
SYNGAP1-204ENST00000449372 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 MOB4Q9Y3A3 225 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGHV3OR16-8A0A075B7F1 116 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 CLEC2BQ92478 149 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 C11orf21Q9P2W6 132 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 SMCR5Q8TEV8 140 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 ICOSQ9Y6W8 199 aa10.09□□□□□ -0.79
SYNGAP1-204ENST00000449372 ABCA2Q9BZC7 2435 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 TMEM223A0PJW6 202 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 F5H697 171 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 NDUFA4O00483 81 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 SPTBN1Q01082 2364 aaKnown RBP10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 H3BUA1 57 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 SPRY2O43597 315 aa10.08□□□□□ -0.8
SYNGAP1-204ENST00000449372 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
SYNGAP1-204ENST00000449372 FLNCQ14315 2725 aa10.07□□□□□ -0.8
SYNGAP1-204ENST00000449372 DSCR8Q96T75 97 aa10.07□□□□□ -0.8
SYNGAP1-204ENST00000449372 U3KQE9 123 aa10.07□□□□□ -0.8
SYNGAP1-204ENST00000449372 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 TSHBP01222 138 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 TMEM258P61165 79 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 TIMM17AQ99595 171 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 OXTP01178 125 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 V9GYY9 64 aa10.06□□□□□ -0.8
SYNGAP1-204ENST00000449372 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 Q5XG85 94 aa10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 PRO0628Q9UI54 55 aa10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 ATOX1O00244 68 aa10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-204ENST00000449372 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms