RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
UBE2F-217ENST00000448502 COX11Q9Y6N1 276 aa13.31□□□□□ -0.28
UBE2F-217ENST00000448502 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
UBE2F-217ENST00000448502 RHODO00212 210 aa13.3□□□□□ -0.28
UBE2F-217ENST00000448502 SNAI2O43623 268 aa13.3□□□□□ -0.28
UBE2F-217ENST00000448502 OR2D3Q8NGH3 330 aa13.3□□□□□ -0.28
UBE2F-217ENST00000448502 TPPP3Q9BW30 176 aa13.3□□□□□ -0.28
UBE2F-217ENST00000448502 CXCL1P09341 107 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 BLOC1S1P78537 153 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 RMI2Q96E14 147 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
UBE2F-217ENST00000448502 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-217ENST00000448502 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 FAT3Q8TDW7 4589 aa13.29□□□□□ -0.28
UBE2F-217ENST00000448502 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
UBE2F-217ENST00000448502 SPANXN1Q5VSR9 72 aa13.28□□□□□ -0.28
UBE2F-217ENST00000448502 URGCP-MRPS24S4R325 110 aa13.28□□□□□ -0.28
UBE2F-217ENST00000448502 OR5AL1P0C617 328 aa13.27□□□□□ -0.29
UBE2F-217ENST00000448502 KRTAP10-4P60372 401 aaPredicted RBP13.27□□□□□ -0.29
UBE2F-217ENST00000448502 ZNF56Q15929 161 aa13.27□□□□□ -0.29
UBE2F-217ENST00000448502 Q8N976 141 aa13.27□□□□□ -0.29
UBE2F-217ENST00000448502 K7EN84 100 aa13.26□□□□□ -0.29
UBE2F-217ENST00000448502 CEBPGP53567 150 aa13.26□□□□□ -0.29
UBE2F-217ENST00000448502 HMCN2Q8NDA2 5059 aa13.26□□□□□ -0.29
UBE2F-217ENST00000448502 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
UBE2F-217ENST00000448502 CHAC1Q9BUX1 264 aa13.26□□□□□ -0.29
UBE2F-217ENST00000448502 P01737 135 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 LYPD6BQ8NI32 183 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
UBE2F-217ENST00000448502 ATRAIDQ6UW56 229 aa13.24□□□□□ -0.29
UBE2F-217ENST00000448502 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
UBE2F-217ENST00000448502 CHCHD7Q9BUK0 85 aa13.24□□□□□ -0.29
UBE2F-217ENST00000448502 RNASE7Q9H1E1 156 aaKnown RBP13.24□□□□□ -0.29
UBE2F-217ENST00000448502 A0A087WX48 190 aa13.23□□□□□ -0.29
UBE2F-217ENST00000448502 F5H697 171 aa13.23□□□□□ -0.29
UBE2F-217ENST00000448502 TAGLN2P37802 199 aaKnown RBP13.23□□□□□ -0.29
UBE2F-217ENST00000448502 UBE2D3P61077 147 aa13.23□□□□□ -0.29
UBE2F-217ENST00000448502 UBE2D2P62837 147 aa13.23□□□□□ -0.29
UBE2F-217ENST00000448502 KIF25-AS1Q9Y6Z4 181 aa13.23□□□□□ -0.29
UBE2F-217ENST00000448502 TRBV10-1A0A0K0K1A3 114 aa13.22□□□□□ -0.29
UBE2F-217ENST00000448502 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
UBE2F-217ENST00000448502 RAB4BP61018 213 aa13.22□□□□□ -0.29
UBE2F-217ENST00000448502 SMIM12Q96EX1 92 aa13.22□□□□□ -0.29
UBE2F-217ENST00000448502 PKHD1L1Q86WI1 4243 aa13.21□□□□□ -0.29
UBE2F-217ENST00000448502 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.29
UBE2F-217ENST00000448502 ELOBQ15370 118 aa13.21□□□□□ -0.29
UBE2F-217ENST00000448502 LYZL1Q6UWQ5 148 aa13.21□□□□□ -0.29
UBE2F-217ENST00000448502 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.29
UBE2F-217ENST00000448502 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.29
UBE2F-217ENST00000448502 TRBV7-3A0A075B6L6 115 aa13.2□□□□□ -0.3
UBE2F-217ENST00000448502 MGPP08493 103 aa13.2□□□□□ -0.3
UBE2F-217ENST00000448502 EIF5A2Q9GZV4 153 aaKnown RBP13.2□□□□□ -0.3
UBE2F-217ENST00000448502 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
UBE2F-217ENST00000448502 OR10G8Q8NGN5 311 aa13.19□□□□□ -0.3
UBE2F-217ENST00000448502 AP1S3Q96PC3 154 aa13.19□□□□□ -0.3
UBE2F-217ENST00000448502 SMIM17P0DL12 118 aa13.18□□□□□ -0.3
UBE2F-217ENST00000448502 Q0VG73 95 aa13.18□□□□□ -0.3
UBE2F-217ENST00000448502 KCNIP4Q6PIL6 250 aa13.18□□□□□ -0.3
UBE2F-217ENST00000448502 ENHOQ6UWT2 76 aa13.18□□□□□ -0.3
UBE2F-217ENST00000448502 RPP21Q9H633 154 aaKnown RBP13.18□□□□□ -0.3
UBE2F-217ENST00000448502 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
UBE2F-217ENST00000448502 TRBV6-8A0A0A6YYG3 113 aa13.17□□□□□ -0.3
UBE2F-217ENST00000448502 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
UBE2F-217ENST00000448502 FAM210AQ96ND0 272 aa13.17□□□□□ -0.3
UBE2F-217ENST00000448502 C1orf43Q9BWL3 253 aa13.17□□□□□ -0.3
UBE2F-217ENST00000448502 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
UBE2F-217ENST00000448502 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
UBE2F-217ENST00000448502 CACNG7P62955 275 aa13.16□□□□□ -0.3
UBE2F-217ENST00000448502 MPV17L2Q567V2 206 aa13.16□□□□□ -0.3
UBE2F-217ENST00000448502 C15orf54Q8N8G6 183 aa13.16□□□□□ -0.3
UBE2F-217ENST00000448502 NTF3P20783 257 aa13.15□□□□□ -0.3
UBE2F-217ENST00000448502 C14orf177Q52M58 125 aa13.15□□□□□ -0.3
UBE2F-217ENST00000448502 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
UBE2F-217ENST00000448502 OXTP01178 125 aa13.14□□□□□ -0.31
UBE2F-217ENST00000448502 CTRLP40313 264 aa13.14□□□□□ -0.31
UBE2F-217ENST00000448502 GTSF1Q8WW33 167 aa13.14□□□□□ -0.31
UBE2F-217ENST00000448502 SMIM7Q9BQ49 75 aa13.14□□□□□ -0.31
UBE2F-217ENST00000448502 C9JQL5 133 aa13.13□□□□□ -0.31
UBE2F-217ENST00000448502 F2Z2F3 143 aa13.13□□□□□ -0.31
UBE2F-217ENST00000448502 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
UBE2F-217ENST00000448502 CRPP02741 224 aa13.13□□□□□ -0.31
UBE2F-217ENST00000448502 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
UBE2F-217ENST00000448502 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
UBE2F-217ENST00000448502 USP17L23D6RBM5 183 aa13.12□□□□□ -0.31
UBE2F-217ENST00000448502 M0QY20 66 aa13.12□□□□□ -0.31
UBE2F-217ENST00000448502 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
UBE2F-217ENST00000448502 FOXA3P55318 350 aaPredicted RBP13.12□□□□□ -0.31
UBE2F-217ENST00000448502 TWIST1Q15672 202 aa13.12□□□□□ -0.31
UBE2F-217ENST00000448502 TEX261Q6UWH6 196 aa13.12□□□□□ -0.31
UBE2F-217ENST00000448502 UBR4Q5T4S7 5183 aa13.12□□□□□ -0.31
UBE2F-217ENST00000448502 ZNF727A8MUV8 499 aa13.11□□□□□ -0.31
UBE2F-217ENST00000448502 NTM-AS1Q6ZSK4 140 aa13.11□□□□□ -0.31
UBE2F-217ENST00000448502 LINC01551Q86U37 167 aa13.11□□□□□ -0.31
UBE2F-217ENST00000448502 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
UBE2F-217ENST00000448502 PRSS1P07477 247 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms