RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 Q9UF83 564 aa9.72□□□□□ -0.85
CTSS-202ENST00000448301 GAGE12JA6NER3 117 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 CCL18P55774 89 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 RPL36AP83881 106 aaKnown RBP9.71□□□□□ -0.86
CTSS-202ENST00000448301 GAGE1Q13065 139 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 GAGE4Q13068 117 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 GAGE5Q13069 117 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
CTSS-202ENST00000448301 RPL36ALQ969Q0 106 aaKnown RBP9.71□□□□□ -0.86
CTSS-202ENST00000448301 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 RAB4AP20338 218 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 ESRGQ1W209 222 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 AMN1Q8IY45 258 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
CTSS-202ENST00000448301 KMT2CQ8NEZ4 4911 aaKnown RBP9.69□□□□□ -0.86
CTSS-202ENST00000448301 UBE2D3P61077 147 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 UBE2D2P62837 147 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 FAM104BQ5XKR9 115 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
CTSS-202ENST00000448301 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 LCE6AA0A183 80 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 TIRAPP58753 221 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
CTSS-202ENST00000448301 LY6G6CO95867 125 aa9.67□□□□□ -0.86
CTSS-202ENST00000448301 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
CTSS-202ENST00000448301 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
CTSS-202ENST00000448301 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
CTSS-202ENST00000448301 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
CTSS-202ENST00000448301 MRPL51Q4U2R6 128 aaKnown RBP9.66□□□□□ -0.86
CTSS-202ENST00000448301 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
CTSS-202ENST00000448301 DAZ4Q86SG3 579 aaKnown RBP9.65□□□□□ -0.86
CTSS-202ENST00000448301 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
CTSS-202ENST00000448301 RPL39LQ96EH5 51 aaKnown RBP9.65□□□□□ -0.86
CTSS-202ENST00000448301 DAZ3Q9NR90 486 aaKnown RBP9.65□□□□□ -0.86
CTSS-202ENST00000448301 TRBV6-5A0A0K0K1A5 114 aa9.65□□□□□ -0.87
CTSS-202ENST00000448301 ELOBQ15370 118 aa9.65□□□□□ -0.87
CTSS-202ENST00000448301 COX19Q49B96 90 aa9.65□□□□□ -0.87
CTSS-202ENST00000448301 OR10J3Q5JRS4 329 aa9.65□□□□□ -0.87
CTSS-202ENST00000448301 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 GAS8-AS1O95177 125 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 NCR2O95944 276 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 PPP1R17O96001 155 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
CTSS-202ENST00000448301 LELP1Q5T871 98 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 TMEM136Q6ZRR5 245 aa9.64□□□□□ -0.87
CTSS-202ENST00000448301 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 PPBPP02775 128 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 CKS2P33552 79 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
CTSS-202ENST00000448301 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 NRACQ8N912 160 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 GNB1LQ9BYB4 327 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
CTSS-202ENST00000448301 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 D6R8Y8 96 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 YPEL4Q96NS1 127 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 ST20Q9HBF5 79 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 RYR2Q92736 4967 aa9.62□□□□□ -0.87
CTSS-202ENST00000448301 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
CTSS-202ENST00000448301 MT-ND6P03923 174 aa9.61□□□□□ -0.87
CTSS-202ENST00000448301 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
CTSS-202ENST00000448301 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
CTSS-202ENST00000448301 Q9H8V8 135 aa9.61□□□□□ -0.87
CTSS-202ENST00000448301 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 PHOX2AO14813 284 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 SIVA1O15304 175 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 TMEM70Q9BUB7 260 aa9.6□□□□□ -0.87
CTSS-202ENST00000448301 LOC100996750A0A140TA64 210 aa9.59□□□□□ -0.87
CTSS-202ENST00000448301 TNFRSF6BO95407 300 aa9.59□□□□□ -0.87
CTSS-202ENST00000448301 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
CTSS-202ENST00000448301 SUMO2P61956 95 aaKnown RBP9.59□□□□□ -0.87
CTSS-202ENST00000448301 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
CTSS-202ENST00000448301 KRTAP4-6Q9BYQ5 205 aa9.59□□□□□ -0.87
CTSS-202ENST00000448301 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
CTSS-202ENST00000448301 TRBV27A0A0K0K1C4 114 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 I3L3M4 83 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 NPYP01303 97 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 APCSP02743 223 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 COTL1Q14019 142 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 PRELID3AQ96N28 172 aa9.58□□□□□ -0.88
CTSS-202ENST00000448301 TRBV25-1A0A075B6N4 114 aa9.57□□□□□ -0.88
CTSS-202ENST00000448301 DNAH10OSP0CZ25 163 aa9.57□□□□□ -0.88
CTSS-202ENST00000448301 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms