RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SSBP1Q04837 148 aaKnown RBP1.63□□□□□ -2.15
PMS1-216ENST00000447734 PPP1R1CQ8WVI7 109 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 TTC37Q6PGP7 1564 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 ARAP2Q8WZ64 1704 aa1.63□□□□□ -2.15
PMS1-216ENST00000447734 DLEC1Q9Y238 1755 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 ARHGAP5Q13017 1502 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 KIAA0100Q14667 2235 aaKnown RBP1.62□□□□□ -2.15
PMS1-216ENST00000447734 ZNF142P52746 1687 aaPredicted RBP1.62□□□□□ -2.15
PMS1-216ENST00000447734 GNG11P61952 73 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 C10orf128Q5T292 105 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 LINC00208Q96KT6 92 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 LINC00474Q9P2X8 69 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 CASKIN1Q8WXD9 1431 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 SCAPERQ9BY12 1400 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 PHRF1Q9P1Y6 1649 aaKnown RBP1.62□□□□□ -2.15
PMS1-216ENST00000447734 MYH8P13535 1937 aa1.62□□□□□ -2.15
PMS1-216ENST00000447734 ESPL1Q14674 2120 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 NWD2Q9ULI1 1742 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 PPIP5K1Q6PFW1 1433 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 NSD3Q9BZ95 1437 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 TRBV7-1A0A0A6YYK4 115 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 GNGT2O14610 69 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 MT-ATP8P03928 68 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 CCL3L1P16619 93 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 ZNF56Q15929 161 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 FAM74A4Q5TZK3 123 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 Q6ZQY7 126 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 VAMP8Q9BV40 100 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 BET1LQ9NYM9 111 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 V9GYS6 101 aa1.61□□□□□ -2.15
PMS1-216ENST00000447734 NAP1L6A6NFF2 107 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 FXYD1O00168 92 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 KRTDAPP60985 99 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 COX7B2Q8TF08 81 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 TSLPQ969D9 159 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 PATJQ8NI35 1801 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 TEX14Q8IWB6 1497 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 RREB1Q92766 1687 aa1.6□□□□□ -2.15
PMS1-216ENST00000447734 TNS1Q9HBL0 1735 aaKnown RBP1.6□□□□□ -2.15
PMS1-216ENST00000447734 CC2D2AQ9P2K1 1620 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 BLMP54132 1417 aaPredicted RBP1.59□□□□□ -2.15
PMS1-216ENST00000447734 DOCK1Q14185 1865 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 CAV3P56539 151 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 Q86TA4 180 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 DEFB119Q8N690 84 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 CCL19Q99731 98 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 SCP2D1Q9UJQ7 156 aa1.59□□□□□ -2.15
PMS1-216ENST00000447734 NRXN2Q9P2S2 1712 aa1.59□□□□□ -2.16
PMS1-216ENST00000447734 ABCC5O15440 1437 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 FYCO1Q9BQS8 1478 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 ABCA4P78363 2273 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 TRBV7-3A0A075B6L6 115 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 hADV29S1A0JD25 119 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 CLPSL1A2RUU4 121 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 NCR3O14931 201 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 EDDM3BP56851 147 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 ELOF1P60002 83 aaKnown RBP1.58□□□□□ -2.16
PMS1-216ENST00000447734 AFDNP55196 1824 aaKnown RBP1.58□□□□□ -2.16
PMS1-216ENST00000447734 COL4A1P02462 1669 aa1.58□□□□□ -2.16
PMS1-216ENST00000447734 RAPGEF2Q9Y4G8 1499 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 RB1CC1Q8TDY2 1594 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 A0A1W2PPM0 123 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 KLKP1Q107X0 134 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 FAM213BQ8TBF2 198 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 PMCHL2Q9BQD1 86 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 V9GYV3 84 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 E9PCH4 1651 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 ANKRD26Q9UPS8 1709 aa1.57□□□□□ -2.16
PMS1-216ENST00000447734 TROQ12816 1431 aaPredicted RBP1.57□□□□□ -2.16
PMS1-216ENST00000447734 PARP14Q460N5 1801 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 GOLGA3Q08378 1498 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 GAPVD1Q14C86 1478 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 DLG5Q8TDM6 1919 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 CRYM-AS1A6NIL9 109 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 J3QKU1 62 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 SEC11AP67812 179 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 Q0VG73 95 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 C9orf62Q8N4C0 152 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 MGST2Q99735 147 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 ABCA3Q99758 1704 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 MED12Q93074 2177 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 PHIPQ8WWQ0 1821 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 ADGRL2O95490 1459 aa1.56□□□□□ -2.16
PMS1-216ENST00000447734 SPTBP11277 2137 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 MED13Q9UHV7 2174 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 DOCK2Q92608 1830 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.55□□□□□ -2.16
PMS1-216ENST00000447734 TRBV30A0A0K0K1B3 111 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 PPP1R17O96001 155 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 MANBALQ9NQG1 85 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
PMS1-216ENST00000447734 BAZ1AQ9NRL2 1556 aaPredicted RBP1.55□□□□□ -2.16
PMS1-216ENST00000447734 PLXNA1Q9UIW2 1896 aa1.54□□□□□ -2.16
PMS1-216ENST00000447734 IGLC1P0CG04 106 aa1.54□□□□□ -2.16
PMS1-216ENST00000447734 EFNA4P52798 201 aa1.54□□□□□ -2.16
PMS1-216ENST00000447734 SPAG11BQ08648 103 aa1.54□□□□□ -2.16
PMS1-216ENST00000447734 SPAG11AQ6PDA7 123 aa1.54□□□□□ -2.16
PMS1-216ENST00000447734 LINC00575Q6W349 94 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms