RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 A8MWL6 223 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 M0QY20 66 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 PEA15Q15121 130 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 WDR73Q6P4I2 378 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
HDAC4-204ENST00000446876 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
HDAC4-204ENST00000446876 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
HDAC4-204ENST00000446876 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC4-204ENST00000446876 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
HDAC4-204ENST00000446876 KRTAP10-2P60368 255 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
HDAC4-204ENST00000446876 ADIRFQ15847 76 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 CT83Q5H943 113 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 NIT1Q86X76 327 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 ISOC2Q96AB3 205 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 OSTCQ9NRP0 149 aa9.96□□□□□ -0.82
HDAC4-204ENST00000446876 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
HDAC4-204ENST00000446876 V9GYV3 84 aa9.95□□□□□ -0.82
HDAC4-204ENST00000446876 DNAH5Q8TE73 4624 aa9.95□□□□□ -0.82
HDAC4-204ENST00000446876 HERC2O95714 4834 aa9.95□□□□□ -0.82
HDAC4-204ENST00000446876 TRBV6-8A0A0A6YYG3 113 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 TRAV26-2A0A0B4J265 109 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 C16orf90A8MZG2 172 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 TSKUQ8WUA8 353 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 NAT8Q9UHE5 227 aa9.94□□□□□ -0.82
HDAC4-204ENST00000446876 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 H7C1H1 209 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 RASL11AQ6T310 242 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 C15orf54Q8N8G6 183 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 URGCP-MRPS24S4R325 110 aa9.93□□□□□ -0.82
HDAC4-204ENST00000446876 LRP1BQ9NZR2 4599 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 A0A087WTM6 91 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 LAGE3Q14657 143 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 SMDT1Q9H4I9 107 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
HDAC4-204ENST00000446876 A0A087WX48 190 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 PSCAO43653 123 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 RAB14P61106 215 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.91□□□□□ -0.82
HDAC4-204ENST00000446876 BORCS7Q96B45 105 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 RPL39LQ96EH5 51 aaKnown RBP9.91□□□□□ -0.82
HDAC4-204ENST00000446876 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
HDAC4-204ENST00000446876 A0A1B0GUT8 65 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 IFITM2Q01629 132 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 MPV17L2Q567V2 206 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 NIT2Q9NQR4 276 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 RYR1P21817 5038 aa9.9□□□□□ -0.82
HDAC4-204ENST00000446876 EREGO14944 169 aa9.89□□□□□ -0.83
HDAC4-204ENST00000446876 GAGE6Q13070 117 aa9.89□□□□□ -0.83
HDAC4-204ENST00000446876 KCNIP4Q6PIL6 250 aa9.89□□□□□ -0.83
HDAC4-204ENST00000446876 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 GAS8-AS1O95177 125 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 TMEM97Q5BJF2 176 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 Q8N976 141 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 CHCHD7Q9BUK0 85 aa9.88□□□□□ -0.83
HDAC4-204ENST00000446876 TRAV8-3A0A0A6YYJ7 113 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 WFDC2Q14508 124 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 CLLU1Q5K131 121 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
HDAC4-204ENST00000446876 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 MAPKAPK5-AS1Q8N8E1 139 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 RNF185Q96GF1 192 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 TM2D2Q9BX73 214 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
HDAC4-204ENST00000446876 IGKV2D-24A0A075B6R9 120 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 LECT2O14960 151 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
HDAC4-204ENST00000446876 RBX1P62877 108 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 RIGQ13278 110 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 ELOBQ15370 118 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 TMEM191AQ9H0A3 160 aa9.85□□□□□ -0.83
HDAC4-204ENST00000446876 APOBP04114 4563 aaKnown RBP9.84□□□□□ -0.83
HDAC4-204ENST00000446876 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 RAB4AP20338 218 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 COTL1Q14019 142 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 ENHOQ6UWT2 76 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 FRZBQ92765 325 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
HDAC4-204ENST00000446876 SDHAF1A6NFY7 115 aa9.83□□□□□ -0.84
HDAC4-204ENST00000446876 NCR2O95944 276 aa9.83□□□□□ -0.84
HDAC4-204ENST00000446876 CRPP02741 224 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms