RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 LAGE3Q14657 143 aa12.56□□□□□ -0.4
HDAC4-203ENST00000445704 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
HDAC4-203ENST00000445704 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
HDAC4-203ENST00000445704 TEX261Q6UWH6 196 aa12.55□□□□□ -0.4
HDAC4-203ENST00000445704 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
HDAC4-203ENST00000445704 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
HDAC4-203ENST00000445704 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
HDAC4-203ENST00000445704 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
HDAC4-203ENST00000445704 M0QY20 66 aa12.54□□□□□ -0.4
HDAC4-203ENST00000445704 EREGO14944 169 aa12.54□□□□□ -0.4
HDAC4-203ENST00000445704 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
HDAC4-203ENST00000445704 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
HDAC4-203ENST00000445704 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
HDAC4-203ENST00000445704 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 PSCAO43653 123 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 DNAJC30Q96LL9 226 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 DPH3P1Q9H4G8 78 aa12.53□□□□□ -0.4
HDAC4-203ENST00000445704 C9JQL5 133 aa12.52□□□□□ -0.41
HDAC4-203ENST00000445704 TWIST1Q15672 202 aa12.52□□□□□ -0.41
HDAC4-203ENST00000445704 NTM-AS1Q6ZSK4 140 aa12.52□□□□□ -0.41
HDAC4-203ENST00000445704 URGCP-MRPS24S4R325 110 aa12.52□□□□□ -0.41
HDAC4-203ENST00000445704 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.41
HDAC4-203ENST00000445704 HSPG2P98160 4391 aa12.51□□□□□ -0.41
HDAC4-203ENST00000445704 SRSF3P84103 164 aaKnown RBP12.51□□□□□ -0.41
HDAC4-203ENST00000445704 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
HDAC4-203ENST00000445704 H7C1H1 209 aa12.5□□□□□ -0.41
HDAC4-203ENST00000445704 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
HDAC4-203ENST00000445704 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
HDAC4-203ENST00000445704 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
HDAC4-203ENST00000445704 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
HDAC4-203ENST00000445704 A0A087WX48 190 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 A8MWL6 223 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 CT83Q5H943 113 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
HDAC4-203ENST00000445704 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
HDAC4-203ENST00000445704 WFDC2Q14508 124 aa12.48□□□□□ -0.41
HDAC4-203ENST00000445704 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
HDAC4-203ENST00000445704 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
HDAC4-203ENST00000445704 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
HDAC4-203ENST00000445704 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-203ENST00000445704 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
HDAC4-203ENST00000445704 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
HDAC4-203ENST00000445704 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 TMEM97Q5BJF2 176 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 Q8N814 137 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 UBE2WQ96B02 151 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
HDAC4-203ENST00000445704 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
HDAC4-203ENST00000445704 TMEM241Q24JQ0 296 aa12.45□□□□□ -0.42
HDAC4-203ENST00000445704 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
HDAC4-203ENST00000445704 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
HDAC4-203ENST00000445704 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
HDAC4-203ENST00000445704 V9GYV3 84 aa12.45□□□□□ -0.42
HDAC4-203ENST00000445704 PCLOQ9Y6V0 5065 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 TRBV25-1A0A075B6N4 114 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 ELOBQ15370 118 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 Q8N976 141 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
HDAC4-203ENST00000445704 IGKV2D-24A0A075B6R9 120 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 HIGD1CA8MV81 97 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 LECT2O14960 151 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 GAGE6Q13070 117 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 PEA15Q15121 130 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 ATRAIDQ6UW56 229 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
HDAC4-203ENST00000445704 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
HDAC4-203ENST00000445704 ADIRFQ15847 76 aa12.42□□□□□ -0.42
HDAC4-203ENST00000445704 RMI2Q96E14 147 aa12.42□□□□□ -0.42
HDAC4-203ENST00000445704 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
HDAC4-203ENST00000445704 KRTAP4-5Q9BYR2 181 aa12.42□□□□□ -0.42
HDAC4-203ENST00000445704 NAT8Q9UHE5 227 aa12.42□□□□□ -0.42
HDAC4-203ENST00000445704 IGLV5-52A0A0A0MRZ9 124 aa12.41□□□□□ -0.42
HDAC4-203ENST00000445704 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
HDAC4-203ENST00000445704 RBX1P62877 108 aa12.41□□□□□ -0.42
HDAC4-203ENST00000445704 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
HDAC4-203ENST00000445704 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
HDAC4-203ENST00000445704 COX11Q9Y6N1 276 aa12.41□□□□□ -0.42
HDAC4-203ENST00000445704 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 GCSHP23434 173 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 PKIAP61925 76 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 NTN5Q8WTR8 489 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-203ENST00000445704 FRZBQ92765 325 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 SMDT1Q9H4I9 107 aa12.4□□□□□ -0.42
HDAC4-203ENST00000445704 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
HDAC4-203ENST00000445704 CRPP02741 224 aa12.39□□□□□ -0.43
HDAC4-203ENST00000445704 Q0VG73 95 aa12.39□□□□□ -0.43
HDAC4-203ENST00000445704 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms