RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ANXA2RQ3ZCQ2 193 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 NTN5Q8WTR8 489 aaPredicted RBP8.95□□□□□ -0.98
LTBR-203ENST00000441074 METTL26Q96S19 204 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 TP53TG1Q9Y2A0 90 aa8.95□□□□□ -0.98
LTBR-203ENST00000441074 IGHV3OR16-13A0A075B7E8 117 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 IGHV3-74A0A0B4J1X5 117 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 TMEM170BQ5T4T1 132 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 EEF1AKMT3Q96AZ1 226 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 CCDC168Q8NDH2 2452 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 TRBV7-1A0A0A6YYK4 115 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 TRAV21A0A0B4J279 112 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 SPRY2O43597 315 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
LTBR-203ENST00000441074 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
LTBR-203ENST00000441074 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 ODF3Q96PU9 254 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 U3KQE9 123 aa8.94□□□□□ -0.98
LTBR-203ENST00000441074 TRAV8-4A0A0B4J246 113 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 IGF1P05019 195 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 ECSCRQ19T08 205 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 ZFAND2AQ8N6M9 145 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 LINC00477Q96M19 166 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 SIRPDQ9H106 197 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 IGHV4OR15-8A0A075B7B6 117 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 A0A087WW49 117 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 ATP6V0E1O15342 81 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 HERV-K104P63124 156 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 ZNF876PQ49A33 203 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 ZNRF2Q8NHG8 242 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 C16orf92Q96LL3 132 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 CCDC140Q96MF4 163 aa8.93□□□□□ -0.98
LTBR-203ENST00000441074 PDZD2O15018 2839 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 ARL3P36405 182 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 UBE2E1P51965 193 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
LTBR-203ENST00000441074 BRD3OSQ6XYD6 125 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 CUBNO60494 3623 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
LTBR-203ENST00000441074 TRBV10-2A0A0K0K1G8 114 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 CLEC19AQ6UXS0 136 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 C10orf105Q8TEF2 133 aa8.92□□□□□ -0.98
LTBR-203ENST00000441074 TEX15Q9BXT5 2789 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 J3KRW8 73 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 LEPROTO15243 131 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 SAA4P35542 130 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
LTBR-203ENST00000441074 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 FAM159AQ6UWV7 190 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 C9orf139Q6ZV77 190 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 OR10J6PQ8NGY7 276 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.91□□□□□ -0.98
LTBR-203ENST00000441074 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 VCYO14598 125 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
LTBR-203ENST00000441074 MUSTN1Q8IVN3 82 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 C20orf173Q96LM9 149 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 KIF25-AS1Q9Y6Z4 181 aa8.91□□□□□ -0.98
LTBR-203ENST00000441074 TRBV30A0A0K0K1B3 111 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 H7C2G1 150 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 NXPH4O95158 308 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 ELANEP08246 267 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 LINC00315P59091 139 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 PIMREGQ9BSJ6 248 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 TLN2Q9Y4G6 2542 aa8.9□□□□□ -0.98
LTBR-203ENST00000441074 TRAV2A0A0B4J234 112 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 H3BMM0 161 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 LGALS9O00182 355 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 RNASE3P12724 160 aaKnown RBP8.89□□□□□ -0.99
LTBR-203ENST00000441074 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 OVOL1O14753 267 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 Q1RN00 199 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 MDFICQ9P1T7 246 aa8.89□□□□□ -0.99
LTBR-203ENST00000441074 GNRH2O43555 120 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 A0A0J9YX75 114 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 FAM223BA6NKX1 122 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 M0R2P5 195 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 AVPP01185 164 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 IGHV4-38-2P0DP08 117 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 TMEM219Q86XT9 240 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
LTBR-203ENST00000441074 RNASE4P34096 147 aaKnown RBP8.87□□□□□ -0.99
LTBR-203ENST00000441074 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 FAM19A4Q96LR4 140 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 SUMO4Q6EEV6 95 aa8.87□□□□□ -0.99
LTBR-203ENST00000441074 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
LTBR-203ENST00000441074 TRBV27A0A0K0K1C4 114 aa8.86□□□□□ -0.99
LTBR-203ENST00000441074 G3V318 75 aa8.86□□□□□ -0.99
LTBR-203ENST00000441074 TRIAP1O43715 76 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms