RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 DNLZQ5SXM8 178 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 SAMD13Q5VXD3 122 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 C12orf54Q6X4T0 127 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 ZNF738Q8NE65 137 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 CNFNQ9BYD5 112 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 ANK3Q12955 4377 aaKnown RBP4.48□□□□□ -1.69
SPEN-202ENST00000438066 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 LOC102724200A0A096LPH7 203 aaPredicted RBP4.48□□□□□ -1.69
SPEN-202ENST00000438066 FABP5P3A8MUU1 101 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 OVOL1O14753 267 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 SYNJ2BPP57105 145 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 HIST1H1AQ02539 215 aaPredicted RBP4.48□□□□□ -1.69
SPEN-202ENST00000438066 PRR9Q5T870 116 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 ZNF493Q6ZR52 646 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 BAGE3Q86Y29 109 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 NKAPP1Q8N9T2 125 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 FAM19A4Q96LR4 140 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 XCL2Q9UBD3 114 aa4.48□□□□□ -1.69
SPEN-202ENST00000438066 SORL1Q92673 2214 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 IGKV3D-20A0A0C4DH25 116 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 C2orf70A6NJV1 201 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
SPEN-202ENST00000438066 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
SPEN-202ENST00000438066 DEFB1P60022 68 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 PAFAH1B2P68402 229 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 JOSD1Q15040 202 aaPredicted RBP4.47□□□□□ -1.69
SPEN-202ENST00000438066 DEFB136Q30KP8 78 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 LINC00336Q6ZUF6 198 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 OR8A1Q8NGG7 326 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 OR10J6PQ8NGY7 276 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 WNK1Q9H4A3 2382 aa4.47□□□□□ -1.69
SPEN-202ENST00000438066 AGRNO00468 2067 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 IGKV3-7A0A075B6H7 116 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 OXTP01178 125 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 ORM1P02763 201 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 IQCJQ1A5X6 159 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 Q1RN00 199 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 BORCS7Q96B45 105 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 MAP1LC3CQ9BXW4 147 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 MS4A6AQ9H2W1 248 aa4.46□□□□□ -1.69
SPEN-202ENST00000438066 LINC01619G3V211 115 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 CRLF1O75462 422 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 ZNF324O75467 553 aaPredicted RBP4.46□□□□□ -1.7
SPEN-202ENST00000438066 GPX1P07203 203 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 APOC4P55056 127 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 S100A12P80511 92 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 Q6ZQT7 251 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 C16orf95Q9H693 158 aa4.46□□□□□ -1.7
SPEN-202ENST00000438066 KLLNB2CW77 178 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 SNAI2O43623 268 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 REG3AQ06141 175 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 VAMP3Q15836 100 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 OR11H1Q8NG94 326 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 ODF3Q96PU9 254 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 SAMD10Q9BYL1 202 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 U3KQK5 164 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 C2CD3Q4AC94 2353 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 JMJD1CQ15652 2540 aa4.45□□□□□ -1.7
SPEN-202ENST00000438066 FN1P02751 2386 aaKnown RBP4.44□□□□□ -1.7
SPEN-202ENST00000438066 TRAV21A0A0B4J279 112 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 A0A0J9YX75 114 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 A0A0J9YXY3 114 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 OR5AL1P0C617 328 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 ZNF688P0C7X2 276 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 NTF3P20783 257 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 SNRPD3P62318 126 aaKnown RBP4.44□□□□□ -1.7
SPEN-202ENST00000438066 KIAA0087Q14695 138 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 PSMG4Q5JS54 123 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 NIT1Q86X76 327 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 OR1N2Q8NGR9 330 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 LINC01006Q8NI28 216 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 SMR3AQ99954 134 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 TMEM191AQ9H0A3 160 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 MUC4Q99102 2169 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
SPEN-202ENST00000438066 TRAV2A0A0B4J234 112 aa4.43□□□□□ -1.7
SPEN-202ENST00000438066 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
SPEN-202ENST00000438066 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
SPEN-202ENST00000438066 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
SPEN-202ENST00000438066 FAM19A2Q8N3H0 131 aa4.43□□□□□ -1.7
SPEN-202ENST00000438066 OR10AG1Q8NH19 301 aa4.43□□□□□ -1.7
SPEN-202ENST00000438066 ZNF418Q8TF45 676 aaPredicted RBP4.43□□□□□ -1.7
SPEN-202ENST00000438066 CHCHD1Q96BP2 118 aaKnown RBP4.43□□□□□ -1.7
SPEN-202ENST00000438066 A8MTW9 85 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms