RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 FAT2Q9NYQ8 4349 aa-0.94□□□□□ -2.56
LINC01239-201ENST00000433645 PRM1P04553 51 aa-0.94□□□□□ -2.56
LINC01239-201ENST00000433645 TCTE3Q8IZS6 198 aa-0.94□□□□□ -2.56
LINC01239-201ENST00000433645 MYH13Q9UKX3 1938 aa-0.94□□□□□ -2.56
LINC01239-201ENST00000433645 WNK1Q9H4A3 2382 aa-0.94□□□□□ -2.56
LINC01239-201ENST00000433645 MUC22E2RYF6 1773 aaPredicted RBP-0.95□□□□□ -2.56
LINC01239-201ENST00000433645 TNFSF15O95150 251 aa-0.95□□□□□ -2.56
LINC01239-201ENST00000433645 CLLU1Q5K131 121 aa-0.95□□□□□ -2.56
LINC01239-201ENST00000433645 WFDC6Q9BQY6 131 aa-0.95□□□□□ -2.56
LINC01239-201ENST00000433645 HSPB11Q9Y547 144 aa-0.95□□□□□ -2.56
LINC01239-201ENST00000433645 TSTD3H0UI37 97 aa-0.96□□□□□ -2.56
LINC01239-201ENST00000433645 EDDM3BP56851 147 aa-0.96□□□□□ -2.56
LINC01239-201ENST00000433645 LINC01545Q5VT33 79 aa-0.96□□□□□ -2.56
LINC01239-201ENST00000433645 SPANXA1Q9NS26 97 aa-0.96□□□□□ -2.56
LINC01239-201ENST00000433645 LSM2Q9Y333 95 aaKnown RBP-0.96□□□□□ -2.56
LINC01239-201ENST00000433645 CSPG4Q6UVK1 2322 aa-0.97□□□□□ -2.56
LINC01239-201ENST00000433645 NDUFA12Q9UI09 145 aa-0.97□□□□□ -2.56
LINC01239-201ENST00000433645 HIGD1AQ9Y241 93 aa-0.97□□□□□ -2.56
LINC01239-201ENST00000433645 GINS2Q9Y248 185 aa-0.97□□□□□ -2.56
LINC01239-201ENST00000433645 ACANP16112 2415 aa-0.97□□□□□ -2.57
LINC01239-201ENST00000433645 IBTKQ9P2D0 1353 aaPredicted RBP-0.97□□□□□ -2.57
LINC01239-201ENST00000433645 MAP1AP78559 2803 aaPredicted RBP-0.97□□□□□ -2.57
LINC01239-201ENST00000433645 WNK3Q9BYP7 1800 aa-0.98□□□□□ -2.57
LINC01239-201ENST00000433645 TRBV20-1A0A075B6N2 111 aa-0.98□□□□□ -2.57
LINC01239-201ENST00000433645 SMIM15Q7Z3B0 74 aa-0.98□□□□□ -2.57
LINC01239-201ENST00000433645 IFT172Q9UG01 1749 aa-0.98□□□□□ -2.57
LINC01239-201ENST00000433645 SPTA1P02549 2419 aa-0.98□□□□□ -2.57
LINC01239-201ENST00000433645 ERCC6Q03468 1493 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 ZMYM4Q5VZL5 1548 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 SPANXN1Q5VSR9 72 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 VSTM2AQ8TAG5 236 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 PLXNB2O15031 1838 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 GVINP1Q7Z2Y8 2422 aa-0.99□□□□□ -2.57
LINC01239-201ENST00000433645 LRRC37A3O60309 1634 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 TRAV1-2A0A0B4J238 106 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 CMPK1P30085 196 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 SPRR1AP35321 89 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 SAR1AQ9NR31 198 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 ZNF609O15014 1411 aa-1□□□□□ -2.57
LINC01239-201ENST00000433645 KDM3BQ7LBC6 1761 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 TRAV22A0A0B4J277 110 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 DBIP07108 87 aaKnown RBP-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 UBE2D1P51668 147 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 KRTAP19-7Q3SYF9 63 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 CCDC153Q494R4 210 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 MORN2Q502X0 79 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 C9orf116Q5BN46 136 aaPredicted RBP-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 Q8IZM0 81 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 SETXQ7Z333 2677 aaKnown RBP-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 USF3Q68DE3 2245 aa-1.01□□□□□ -2.57
LINC01239-201ENST00000433645 STAB2Q8WWQ8 2551 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 FLNBO75369 2602 aaKnown RBP-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 CLPSL1A2RUU4 121 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 NBEAP1P0C6P0 100 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 SPRR2BP35325 72 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 SPAG11BQ08648 103 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 ATRQ13535 2644 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 RPRMQ9NS64 109 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 SPCS1Q9Y6A9 102 aa-1.02□□□□□ -2.57
LINC01239-201ENST00000433645 CDK5RAP2Q96SN8 1893 aa-1.03□□□□□ -2.57
LINC01239-201ENST00000433645 BCL9LQ86UU0 1499 aa-1.03□□□□□ -2.57
LINC01239-201ENST00000433645 DAPK1P53355 1430 aa-1.03□□□□□ -2.57
LINC01239-201ENST00000433645 IFNA17P01571 189 aa-1.03□□□□□ -2.57
LINC01239-201ENST00000433645 NCS1P62166 190 aa-1.03□□□□□ -2.57
LINC01239-201ENST00000433645 BAGE3Q86Y29 109 aa-1.04□□□□□ -2.58
LINC01239-201ENST00000433645 MMGT1Q8N4V1 131 aa-1.04□□□□□ -2.58
LINC01239-201ENST00000433645 EP300Q09472 2414 aaPredicted RBP-1.04□□□□□ -2.58
LINC01239-201ENST00000433645 ADGRB1O14514 1584 aa-1.04□□□□□ -2.58
LINC01239-201ENST00000433645 APOC4-APOC2K7ER74 178 aa-1.05□□□□□ -2.58
LINC01239-201ENST00000433645 PIRTP0C851 137 aa-1.05□□□□□ -2.58
LINC01239-201ENST00000433645 SMIM6P0DI80 62 aa-1.05□□□□□ -2.58
LINC01239-201ENST00000433645 S100A5P33763 92 aa-1.05□□□□□ -2.58
LINC01239-201ENST00000433645 ZNF818PQ6ZRF7 136 aa-1.05□□□□□ -2.58
LINC01239-201ENST00000433645 NBEAL1Q6ZS30 2694 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 LRP1BQ9NZR2 4599 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 MYH6P13533 1939 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 C10orf82Q8WW14 230 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 OVOS2A0A0J9YW53 1432 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 OVOS2Q6IE36 1432 aa-1.06□□□□□ -2.58
LINC01239-201ENST00000433645 SYNJ1O43426 1573 aa-1.07□□□□□ -2.58
LINC01239-201ENST00000433645 CHD8Q9HCK8 2581 aa-1.07□□□□□ -2.58
LINC01239-201ENST00000433645 RPL7L1Q6DKI1 246 aaKnown RBP-1.07□□□□□ -2.58
LINC01239-201ENST00000433645 PXDNQ92626 1479 aa-1.07□□□□□ -2.58
LINC01239-201ENST00000433645 TMEM2Q9UHN6 1383 aa-1.08□□□□□ -2.58
LINC01239-201ENST00000433645 A6NIN4 97 aa-1.08□□□□□ -2.58
LINC01239-201ENST00000433645 CFAP126Q5VTH2 177 aa-1.08□□□□□ -2.58
LINC01239-201ENST00000433645 MIC13Q5XKP0 118 aa-1.08□□□□□ -2.58
LINC01239-201ENST00000433645 LAMC1P11047 1609 aa-1.08□□□□□ -2.58
LINC01239-201ENST00000433645 GNG14A0A1W2PPG7 69 aa-1.09□□□□□ -2.58
LINC01239-201ENST00000433645 H0YJX3 145 aa-1.09□□□□□ -2.58
LINC01239-201ENST00000433645 SCN3BQ9NY72 215 aa-1.09□□□□□ -2.58
LINC01239-201ENST00000433645 MYO7BQ6PIF6 2116 aa-1.09□□□□□ -2.58
LINC01239-201ENST00000433645 MYH8P13535 1937 aa-1.1□□□□□ -2.59
LINC01239-201ENST00000433645 FAM92AA1XBS5 289 aa-1.1□□□□□ -2.59
LINC01239-201ENST00000433645 DISP2A7MBM2 1401 aa-1.1□□□□□ -2.59
LINC01239-201ENST00000433645 C10orf71Q711Q0 1435 aa-1.1□□□□□ -2.59
LINC01239-201ENST00000433645 LRP6O75581 1613 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 LRRC37A2A6NM11 1700 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 NWD2Q9ULI1 1742 aa-1.11□□□□□ -2.59
LINC01239-201ENST00000433645 NPFFO15130 113 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms